Protein–RNA interactions for Protein: E0CX42

Gm4491, Predicted gene 4491, mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4491E0CX42 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm4491E0CX42 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm4491E0CX42 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm4491E0CX42 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC12.74□□□□□ -0.37
Gm4491E0CX42 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm4491E0CX42 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm4491E0CX42 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm4491E0CX42 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm4491E0CX42 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm4491E0CX42 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Gm4491E0CX42 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm4491E0CX42 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm4491E0CX42 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Gm4491E0CX42 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm4491E0CX42 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm4491E0CX42 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm4491E0CX42 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Gm4491E0CX42 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm4491E0CX42 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Gm4491E0CX42 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Gm4491E0CX42 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Gm4491E0CX42 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gm4491E0CX42 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Gm4491E0CX42 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm4491E0CX42 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm4491E0CX42 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Gm4491E0CX42 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC12.7□□□□□ -0.38
Gm4491E0CX42 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Gm4491E0CX42 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm4491E0CX42 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm4491E0CX42 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm4491E0CX42 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC12.7□□□□□ -0.38
Gm4491E0CX42 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm4491E0CX42 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm4491E0CX42 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm4491E0CX42 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm4491E0CX42 AC122428.3-201ENSMUST00000215551 2290 ntBASIC12.68□□□□□ -0.38
Gm4491E0CX42 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gm4491E0CX42 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC12.68□□□□□ -0.38
Gm4491E0CX42 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm4491E0CX42 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm4491E0CX42 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm4491E0CX42 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm4491E0CX42 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm4491E0CX42 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm4491E0CX42 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm4491E0CX42 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gm4491E0CX42 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm4491E0CX42 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm4491E0CX42 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm4491E0CX42 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm4491E0CX42 AC124392.1-201ENSMUST00000225172 5324 ntBASIC12.65□□□□□ -0.38
Gm4491E0CX42 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm4491E0CX42 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Gm4491E0CX42 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm4491E0CX42 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm4491E0CX42 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm4491E0CX42 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm4491E0CX42 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm4491E0CX42 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Gm4491E0CX42 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm4491E0CX42 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm4491E0CX42 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gm4491E0CX42 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm4491E0CX42 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm4491E0CX42 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm4491E0CX42 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm4491E0CX42 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm4491E0CX42 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm4491E0CX42 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gm4491E0CX42 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm4491E0CX42 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm4491E0CX42 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm4491E0CX42 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm4491E0CX42 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Gm4491E0CX42 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm4491E0CX42 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm4491E0CX42 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm4491E0CX42 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm4491E0CX42 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Gm4491E0CX42 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm4491E0CX42 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm4491E0CX42 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm4491E0CX42 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm4491E0CX42 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Gm4491E0CX42 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm4491E0CX42 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm4491E0CX42 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm4491E0CX42 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm4491E0CX42 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm4491E0CX42 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm4491E0CX42 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Gm4491E0CX42 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm4491E0CX42 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm4491E0CX42 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm4491E0CX42 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC12.58□□□□□ -0.4
Gm4491E0CX42 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm4491E0CX42 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm4491E0CX42 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm4491E0CX42 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms