Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hist1h2abC0HKE1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hist1h2abC0HKE1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hist1h2abC0HKE1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Hist1h2abC0HKE1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Hist1h2abC0HKE1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hist1h2abC0HKE1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Hist1h2abC0HKE1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hist1h2abC0HKE1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hist1h2abC0HKE1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hist1h2abC0HKE1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Hist1h2abC0HKE1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Hist1h2abC0HKE1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hist1h2abC0HKE1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hist1h2abC0HKE1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.37■■□□□ 1.01
Hist1h2abC0HKE1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hist1h2abC0HKE1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hist1h2abC0HKE1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hist1h2abC0HKE1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Hist1h2abC0HKE1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hist1h2abC0HKE1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.36■■□□□ 1.01
Hist1h2abC0HKE1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Hist1h2abC0HKE1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hist1h2abC0HKE1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Hist1h2abC0HKE1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.34■■□□□ 1.01
Hist1h2abC0HKE1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Hist1h2abC0HKE1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Hist1h2abC0HKE1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hist1h2abC0HKE1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hist1h2abC0HKE1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hist1h2abC0HKE1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.32■■□□□ 1
Hist1h2abC0HKE1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hist1h2abC0HKE1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hist1h2abC0HKE1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hist1h2abC0HKE1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hist1h2abC0HKE1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Hist1h2abC0HKE1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.31■■□□□ 1
Hist1h2abC0HKE1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hist1h2abC0HKE1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hist1h2abC0HKE1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hist1h2abC0HKE1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hist1h2abC0HKE1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.29■■□□□ 1
Hist1h2abC0HKE1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.29■■□□□ 1
Hist1h2abC0HKE1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hist1h2abC0HKE1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hist1h2abC0HKE1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hist1h2abC0HKE1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Hist1h2abC0HKE1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hist1h2abC0HKE1 Gm30023-201ENSMUST00000197970 889 ntBASIC21.28■■□□□ 1
Hist1h2abC0HKE1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hist1h2abC0HKE1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hist1h2abC0HKE1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Hist1h2abC0HKE1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hist1h2abC0HKE1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.27■■□□□ 1
Hist1h2abC0HKE1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Hist1h2abC0HKE1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Hist1h2abC0HKE1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Hist1h2abC0HKE1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Hist1h2abC0HKE1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hist1h2abC0HKE1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hist1h2abC0HKE1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Hist1h2abC0HKE1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hist1h2abC0HKE1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hist1h2abC0HKE1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hist1h2abC0HKE1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Hist1h2abC0HKE1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hist1h2abC0HKE1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hist1h2abC0HKE1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.23■□□□□ 0.99
Hist1h2abC0HKE1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hist1h2abC0HKE1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hist1h2abC0HKE1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hist1h2abC0HKE1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Hist1h2abC0HKE1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hist1h2abC0HKE1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hist1h2abC0HKE1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hist1h2abC0HKE1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hist1h2abC0HKE1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hist1h2abC0HKE1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.22■□□□□ 0.99
Hist1h2abC0HKE1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hist1h2abC0HKE1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.22■□□□□ 0.99
Hist1h2abC0HKE1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hist1h2abC0HKE1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hist1h2abC0HKE1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hist1h2abC0HKE1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Hist1h2abC0HKE1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hist1h2abC0HKE1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.2■□□□□ 0.98
Hist1h2abC0HKE1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hist1h2abC0HKE1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Hist1h2abC0HKE1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hist1h2abC0HKE1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hist1h2abC0HKE1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.19■□□□□ 0.98
Hist1h2abC0HKE1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hist1h2abC0HKE1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Hist1h2abC0HKE1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hist1h2abC0HKE1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Hist1h2abC0HKE1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hist1h2abC0HKE1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hist1h2abC0HKE1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hist1h2abC0HKE1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.17■□□□□ 0.98
Hist1h2abC0HKE1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms