Protein–RNA interactions for Protein: B3F5L4

5830411N06Rik, RIKEN cDNA 5830411N06 gene, mousemouse

Predictions only

Length 1,112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5830411N06RikB3F5L4 Gm11599-201ENSMUST00000118720 878 ntBASIC24.6■■□□□ 1.53
5830411N06RikB3F5L4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
5830411N06RikB3F5L4 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.6■■□□□ 1.53
5830411N06RikB3F5L4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
5830411N06RikB3F5L4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
5830411N06RikB3F5L4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.59■■□□□ 1.53
5830411N06RikB3F5L4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
5830411N06RikB3F5L4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
5830411N06RikB3F5L4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
5830411N06RikB3F5L4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
5830411N06RikB3F5L4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
5830411N06RikB3F5L4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
5830411N06RikB3F5L4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.52■■□□□ 1.52
5830411N06RikB3F5L4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
5830411N06RikB3F5L4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
5830411N06RikB3F5L4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
5830411N06RikB3F5L4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
5830411N06RikB3F5L4 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.49■■□□□ 1.51
5830411N06RikB3F5L4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
5830411N06RikB3F5L4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
5830411N06RikB3F5L4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
5830411N06RikB3F5L4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.47■■□□□ 1.51
5830411N06RikB3F5L4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.47■■□□□ 1.51
5830411N06RikB3F5L4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
5830411N06RikB3F5L4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
5830411N06RikB3F5L4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
5830411N06RikB3F5L4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
5830411N06RikB3F5L4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.44■■□□□ 1.5
5830411N06RikB3F5L4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
5830411N06RikB3F5L4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
5830411N06RikB3F5L4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
5830411N06RikB3F5L4 Gm37136-201ENSMUST00000194368 194 ntBASIC24.43■■□□□ 1.5
5830411N06RikB3F5L4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
5830411N06RikB3F5L4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
5830411N06RikB3F5L4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
5830411N06RikB3F5L4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
5830411N06RikB3F5L4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.4■■□□□ 1.5
5830411N06RikB3F5L4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
5830411N06RikB3F5L4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
5830411N06RikB3F5L4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
5830411N06RikB3F5L4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
5830411N06RikB3F5L4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
5830411N06RikB3F5L4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
5830411N06RikB3F5L4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
5830411N06RikB3F5L4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
5830411N06RikB3F5L4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
5830411N06RikB3F5L4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
5830411N06RikB3F5L4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
5830411N06RikB3F5L4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
5830411N06RikB3F5L4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
5830411N06RikB3F5L4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
5830411N06RikB3F5L4 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.33■■□□□ 1.49
5830411N06RikB3F5L4 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.33■■□□□ 1.49
5830411N06RikB3F5L4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
5830411N06RikB3F5L4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
5830411N06RikB3F5L4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.33■■□□□ 1.49
5830411N06RikB3F5L4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
5830411N06RikB3F5L4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
5830411N06RikB3F5L4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
5830411N06RikB3F5L4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
5830411N06RikB3F5L4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
5830411N06RikB3F5L4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.29■■□□□ 1.48
5830411N06RikB3F5L4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
5830411N06RikB3F5L4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.28■■□□□ 1.48
5830411N06RikB3F5L4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
5830411N06RikB3F5L4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
5830411N06RikB3F5L4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.27■■□□□ 1.48
5830411N06RikB3F5L4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
5830411N06RikB3F5L4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
5830411N06RikB3F5L4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.26■■□□□ 1.47
5830411N06RikB3F5L4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.26■■□□□ 1.47
5830411N06RikB3F5L4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
5830411N06RikB3F5L4 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.26■■□□□ 1.47
5830411N06RikB3F5L4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
5830411N06RikB3F5L4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
5830411N06RikB3F5L4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
5830411N06RikB3F5L4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
5830411N06RikB3F5L4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.23■■□□□ 1.47
5830411N06RikB3F5L4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
5830411N06RikB3F5L4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
5830411N06RikB3F5L4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
5830411N06RikB3F5L4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
5830411N06RikB3F5L4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
5830411N06RikB3F5L4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
5830411N06RikB3F5L4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
5830411N06RikB3F5L4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
5830411N06RikB3F5L4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
5830411N06RikB3F5L4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
5830411N06RikB3F5L4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
5830411N06RikB3F5L4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
5830411N06RikB3F5L4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
5830411N06RikB3F5L4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
5830411N06RikB3F5L4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
5830411N06RikB3F5L4 Gm4799-201ENSMUST00000095396 657 ntBASIC24.18■■□□□ 1.46
5830411N06RikB3F5L4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.17■■□□□ 1.46
5830411N06RikB3F5L4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
5830411N06RikB3F5L4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.16■■□□□ 1.46
5830411N06RikB3F5L4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
5830411N06RikB3F5L4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
5830411N06RikB3F5L4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms