Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav12-1A0N8R1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav12-1A0N8R1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12-1A0N8R1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.68■□□□□ 0.74
Trav12-1A0N8R1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trav12-1A0N8R1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12-1A0N8R1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12-1A0N8R1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.66■□□□□ 0.74
Trav12-1A0N8R1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.66■□□□□ 0.74
Trav12-1A0N8R1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav12-1A0N8R1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trav12-1A0N8R1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav12-1A0N8R1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.65■□□□□ 0.74
Trav12-1A0N8R1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav12-1A0N8R1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.64■□□□□ 0.73
Trav12-1A0N8R1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Trav12-1A0N8R1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trav12-1A0N8R1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav12-1A0N8R1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trav12-1A0N8R1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav12-1A0N8R1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trav12-1A0N8R1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav12-1A0N8R1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.63■□□□□ 0.73
Trav12-1A0N8R1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav12-1A0N8R1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12-1A0N8R1 Gm24970-201ENSMUST00000175582 82 ntBASIC19.62■□□□□ 0.73
Trav12-1A0N8R1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12-1A0N8R1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trav12-1A0N8R1 Gm9397-201ENSMUST00000200125 605 ntBASIC19.61■□□□□ 0.73
Trav12-1A0N8R1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav12-1A0N8R1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav12-1A0N8R1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav12-1A0N8R1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav12-1A0N8R1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav12-1A0N8R1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trav12-1A0N8R1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav12-1A0N8R1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav12-1A0N8R1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav12-1A0N8R1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav12-1A0N8R1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav12-1A0N8R1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav12-1A0N8R1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
Trav12-1A0N8R1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Trav12-1A0N8R1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav12-1A0N8R1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav12-1A0N8R1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.57■□□□□ 0.72
Trav12-1A0N8R1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trav12-1A0N8R1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav12-1A0N8R1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.57■□□□□ 0.72
Trav12-1A0N8R1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-1A0N8R1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-1A0N8R1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-1A0N8R1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.56■□□□□ 0.72
Trav12-1A0N8R1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-1A0N8R1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-1A0N8R1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-1A0N8R1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-1A0N8R1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav12-1A0N8R1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav12-1A0N8R1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav12-1A0N8R1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav12-1A0N8R1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.55■□□□□ 0.72
Trav12-1A0N8R1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav12-1A0N8R1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Trav12-1A0N8R1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav12-1A0N8R1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav12-1A0N8R1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav12-1A0N8R1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.53■□□□□ 0.72
Trav12-1A0N8R1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav12-1A0N8R1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav12-1A0N8R1 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.52■□□□□ 0.72
Trav12-1A0N8R1 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.52■□□□□ 0.72
Trav12-1A0N8R1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav12-1A0N8R1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trav12-1A0N8R1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav12-1A0N8R1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav12-1A0N8R1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav12-1A0N8R1 Gm30023-201ENSMUST00000197970 889 ntBASIC19.51■□□□□ 0.71
Trav12-1A0N8R1 Particl-201ENSMUST00000205370 1560 ntBASIC19.51■□□□□ 0.71
Trav12-1A0N8R1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav12-1A0N8R1 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.5■□□□□ 0.71
Trav12-1A0N8R1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav12-1A0N8R1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Trav12-1A0N8R1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trav12-1A0N8R1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav12-1A0N8R1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trav12-1A0N8R1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav12-1A0N8R1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav12-1A0N8R1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav12-1A0N8R1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav12-1A0N8R1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav12-1A0N8R1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav12-1A0N8R1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trav12-1A0N8R1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav12-1A0N8R1 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.46■□□□□ 0.71
Trav12-1A0N8R1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav12-1A0N8R1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav12-1A0N8R1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trav12-1A0N8R1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav12-1A0N8R1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms