Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.65■■□□□ 1.7
Gm5580A0A0N4SVP8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.65■■□□□ 1.7
Gm5580A0A0N4SVP8 Gm9397-201ENSMUST00000200125 605 ntBASIC25.65■■□□□ 1.7
Gm5580A0A0N4SVP8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Gm5580A0A0N4SVP8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
Gm5580A0A0N4SVP8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.64■■□□□ 1.69
Gm5580A0A0N4SVP8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Gm5580A0A0N4SVP8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.64■■□□□ 1.69
Gm5580A0A0N4SVP8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.63■■□□□ 1.69
Gm5580A0A0N4SVP8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Gm5580A0A0N4SVP8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Gm5580A0A0N4SVP8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Gm5580A0A0N4SVP8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Gm5580A0A0N4SVP8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Gm5580A0A0N4SVP8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Gm5580A0A0N4SVP8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Gm5580A0A0N4SVP8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Gm5580A0A0N4SVP8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Gm5580A0A0N4SVP8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Gm5580A0A0N4SVP8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Gm5580A0A0N4SVP8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Gm5580A0A0N4SVP8 Gm24970-201ENSMUST00000175582 82 ntBASIC25.6■■□□□ 1.69
Gm5580A0A0N4SVP8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Gm5580A0A0N4SVP8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Gm5580A0A0N4SVP8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Gm5580A0A0N4SVP8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
Gm5580A0A0N4SVP8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Gm5580A0A0N4SVP8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Gm5580A0A0N4SVP8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Gm5580A0A0N4SVP8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Gm5580A0A0N4SVP8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Gm5580A0A0N4SVP8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Gm5580A0A0N4SVP8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Gm5580A0A0N4SVP8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Gm5580A0A0N4SVP8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
Gm5580A0A0N4SVP8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Gm5580A0A0N4SVP8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Gm5580A0A0N4SVP8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
Gm5580A0A0N4SVP8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Gm5580A0A0N4SVP8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
Gm5580A0A0N4SVP8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Gm5580A0A0N4SVP8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Gm5580A0A0N4SVP8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Gm5580A0A0N4SVP8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.53■■□□□ 1.68
Gm5580A0A0N4SVP8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Gm5580A0A0N4SVP8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Gm5580A0A0N4SVP8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Gm5580A0A0N4SVP8 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.52■■□□□ 1.68
Gm5580A0A0N4SVP8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Gm5580A0A0N4SVP8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Gm5580A0A0N4SVP8 Gm30023-201ENSMUST00000197970 889 ntBASIC25.51■■□□□ 1.67
Gm5580A0A0N4SVP8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Gm5580A0A0N4SVP8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Gm5580A0A0N4SVP8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.5■■□□□ 1.67
Gm5580A0A0N4SVP8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Gm5580A0A0N4SVP8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Gm5580A0A0N4SVP8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Gm5580A0A0N4SVP8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Gm5580A0A0N4SVP8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Gm5580A0A0N4SVP8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Gm5580A0A0N4SVP8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
Gm5580A0A0N4SVP8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Gm5580A0A0N4SVP8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Gm5580A0A0N4SVP8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Gm5580A0A0N4SVP8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Gm5580A0A0N4SVP8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Gm5580A0A0N4SVP8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Gm5580A0A0N4SVP8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.46■■□□□ 1.67
Gm5580A0A0N4SVP8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Gm5580A0A0N4SVP8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.46■■□□□ 1.67
Gm5580A0A0N4SVP8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Gm5580A0A0N4SVP8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Gm5580A0A0N4SVP8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
Gm5580A0A0N4SVP8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.46■■□□□ 1.67
Gm5580A0A0N4SVP8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.46■■□□□ 1.67
Gm5580A0A0N4SVP8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Gm5580A0A0N4SVP8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Gm5580A0A0N4SVP8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Gm5580A0A0N4SVP8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Gm5580A0A0N4SVP8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Gm5580A0A0N4SVP8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Gm5580A0A0N4SVP8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Gm5580A0A0N4SVP8 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.41■■□□□ 1.66
Gm5580A0A0N4SVP8 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.41■■□□□ 1.66
Gm5580A0A0N4SVP8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Gm5580A0A0N4SVP8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Gm5580A0A0N4SVP8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Gm5580A0A0N4SVP8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Gm5580A0A0N4SVP8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Gm5580A0A0N4SVP8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Gm5580A0A0N4SVP8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Gm5580A0A0N4SVP8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Gm5580A0A0N4SVP8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Gm5580A0A0N4SVP8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Gm5580A0A0N4SVP8 Gm45855-201ENSMUST00000212546 880 ntBASIC25.38■■□□□ 1.65
Gm5580A0A0N4SVP8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.37■■□□□ 1.65
Gm5580A0A0N4SVP8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Gm5580A0A0N4SVP8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Gm5580A0A0N4SVP8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Gm5580A0A0N4SVP8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms