Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trbv19A0A0B4J1H4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.86■□□□□ 0.61
Trbv19A0A0B4J1H4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv19A0A0B4J1H4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv19A0A0B4J1H4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv19A0A0B4J1H4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv19A0A0B4J1H4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Trbv19A0A0B4J1H4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv19A0A0B4J1H4 Gm30023-201ENSMUST00000197970 889 ntBASIC18.84■□□□□ 0.61
Trbv19A0A0B4J1H4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv19A0A0B4J1H4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv19A0A0B4J1H4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv19A0A0B4J1H4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv19A0A0B4J1H4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv19A0A0B4J1H4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv19A0A0B4J1H4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv19A0A0B4J1H4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv19A0A0B4J1H4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv19A0A0B4J1H4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv19A0A0B4J1H4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.82■□□□□ 0.6
Trbv19A0A0B4J1H4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv19A0A0B4J1H4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trbv19A0A0B4J1H4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv19A0A0B4J1H4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv19A0A0B4J1H4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv19A0A0B4J1H4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.81■□□□□ 0.6
Trbv19A0A0B4J1H4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv19A0A0B4J1H4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv19A0A0B4J1H4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trbv19A0A0B4J1H4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv19A0A0B4J1H4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv19A0A0B4J1H4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv19A0A0B4J1H4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trbv19A0A0B4J1H4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.76■□□□□ 0.59
Trbv19A0A0B4J1H4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv19A0A0B4J1H4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv19A0A0B4J1H4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv19A0A0B4J1H4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv19A0A0B4J1H4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv19A0A0B4J1H4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv19A0A0B4J1H4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv19A0A0B4J1H4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv19A0A0B4J1H4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv19A0A0B4J1H4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv19A0A0B4J1H4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv19A0A0B4J1H4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv19A0A0B4J1H4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv19A0A0B4J1H4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv19A0A0B4J1H4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.74■□□□□ 0.59
Trbv19A0A0B4J1H4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv19A0A0B4J1H4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv19A0A0B4J1H4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv19A0A0B4J1H4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv19A0A0B4J1H4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv19A0A0B4J1H4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.72■□□□□ 0.59
Trbv19A0A0B4J1H4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trbv19A0A0B4J1H4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv19A0A0B4J1H4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv19A0A0B4J1H4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv19A0A0B4J1H4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv19A0A0B4J1H4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv19A0A0B4J1H4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Trbv19A0A0B4J1H4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv19A0A0B4J1H4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv19A0A0B4J1H4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv19A0A0B4J1H4 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.71■□□□□ 0.59
Trbv19A0A0B4J1H4 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.71■□□□□ 0.59
Trbv19A0A0B4J1H4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv19A0A0B4J1H4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv19A0A0B4J1H4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv19A0A0B4J1H4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv19A0A0B4J1H4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.68■□□□□ 0.58
Trbv19A0A0B4J1H4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv19A0A0B4J1H4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv19A0A0B4J1H4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv19A0A0B4J1H4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trbv19A0A0B4J1H4 Particl-201ENSMUST00000205370 1560 ntBASIC18.66■□□□□ 0.58
Trbv19A0A0B4J1H4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv19A0A0B4J1H4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.65■□□□□ 0.58
Trbv19A0A0B4J1H4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trbv19A0A0B4J1H4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv19A0A0B4J1H4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv19A0A0B4J1H4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv19A0A0B4J1H4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv19A0A0B4J1H4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trbv19A0A0B4J1H4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv19A0A0B4J1H4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv19A0A0B4J1H4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv19A0A0B4J1H4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv19A0A0B4J1H4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trbv19A0A0B4J1H4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Trbv19A0A0B4J1H4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.62■□□□□ 0.57
Trbv19A0A0B4J1H4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv19A0A0B4J1H4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv19A0A0B4J1H4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv19A0A0B4J1H4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv19A0A0B4J1H4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv19A0A0B4J1H4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv19A0A0B4J1H4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv19A0A0B4J1H4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms