Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-20A0A0A6YX66 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-20A0A0A6YX66 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-20A0A0A6YX66 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.1■□□□□ 0.65
Ighv1-20A0A0A6YX66 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-20A0A0A6YX66 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-20A0A0A6YX66 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-20A0A0A6YX66 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-20A0A0A6YX66 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ighv1-20A0A0A6YX66 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-20A0A0A6YX66 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.08■□□□□ 0.64
Ighv1-20A0A0A6YX66 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Ighv1-20A0A0A6YX66 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv1-20A0A0A6YX66 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.07■□□□□ 0.64
Ighv1-20A0A0A6YX66 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv1-20A0A0A6YX66 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ighv1-20A0A0A6YX66 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-20A0A0A6YX66 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-20A0A0A6YX66 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-20A0A0A6YX66 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-20A0A0A6YX66 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Ighv1-20A0A0A6YX66 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-20A0A0A6YX66 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-20A0A0A6YX66 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ighv1-20A0A0A6YX66 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-20A0A0A6YX66 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Ighv1-20A0A0A6YX66 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-20A0A0A6YX66 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-20A0A0A6YX66 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-20A0A0A6YX66 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-20A0A0A6YX66 Amer2-203ENSMUST00000225247 2662 ntBASIC19.02■□□□□ 0.64
Ighv1-20A0A0A6YX66 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv1-20A0A0A6YX66 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.02■□□□□ 0.64
Ighv1-20A0A0A6YX66 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv1-20A0A0A6YX66 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.02■□□□□ 0.63
Ighv1-20A0A0A6YX66 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ighv1-20A0A0A6YX66 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ighv1-20A0A0A6YX66 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-20A0A0A6YX66 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-20A0A0A6YX66 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ighv1-20A0A0A6YX66 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ighv1-20A0A0A6YX66 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-20A0A0A6YX66 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19■□□□□ 0.63
Ighv1-20A0A0A6YX66 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-20A0A0A6YX66 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-20A0A0A6YX66 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-20A0A0A6YX66 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv1-20A0A0A6YX66 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.98■□□□□ 0.63
Ighv1-20A0A0A6YX66 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv1-20A0A0A6YX66 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-20A0A0A6YX66 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-20A0A0A6YX66 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-20A0A0A6YX66 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-20A0A0A6YX66 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-20A0A0A6YX66 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv1-20A0A0A6YX66 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-20A0A0A6YX66 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.94■□□□□ 0.62
Ighv1-20A0A0A6YX66 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ighv1-20A0A0A6YX66 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ighv1-20A0A0A6YX66 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-20A0A0A6YX66 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-20A0A0A6YX66 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv1-20A0A0A6YX66 Gm37136-201ENSMUST00000194368 194 ntBASIC18.91■□□□□ 0.62
Ighv1-20A0A0A6YX66 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv1-20A0A0A6YX66 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv1-20A0A0A6YX66 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv1-20A0A0A6YX66 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-20A0A0A6YX66 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-20A0A0A6YX66 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.9■□□□□ 0.62
Ighv1-20A0A0A6YX66 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.9■□□□□ 0.62
Ighv1-20A0A0A6YX66 Gm6311-201ENSMUST00000073790 878 ntBASIC18.9■□□□□ 0.62
Ighv1-20A0A0A6YX66 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ighv1-20A0A0A6YX66 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-20A0A0A6YX66 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-20A0A0A6YX66 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-20A0A0A6YX66 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ighv1-20A0A0A6YX66 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ighv1-20A0A0A6YX66 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-20A0A0A6YX66 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ighv1-20A0A0A6YX66 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-20A0A0A6YX66 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-20A0A0A6YX66 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.87■□□□□ 0.61
Ighv1-20A0A0A6YX66 Gm4799-201ENSMUST00000095396 657 ntBASIC18.87■□□□□ 0.61
Ighv1-20A0A0A6YX66 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-20A0A0A6YX66 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ighv1-20A0A0A6YX66 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.85■□□□□ 0.61
Ighv1-20A0A0A6YX66 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ighv1-20A0A0A6YX66 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ighv1-20A0A0A6YX66 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-20A0A0A6YX66 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.84■□□□□ 0.61
Ighv1-20A0A0A6YX66 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.84■□□□□ 0.61
Ighv1-20A0A0A6YX66 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Ighv1-20A0A0A6YX66 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-20A0A0A6YX66 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-20A0A0A6YX66 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv1-20A0A0A6YX66 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv1-20A0A0A6YX66 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv1-20A0A0A6YX66 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.83■□□□□ 0.6
Ighv1-20A0A0A6YX66 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Ighv1-20A0A0A6YX66 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms