Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Gm9397-201ENSMUST00000200125 605 ntBASIC17.28■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.28■□□□□ 0.36
Ighv3-3A0A0A6YWL2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Gm45855-201ENSMUST00000212546 880 ntBASIC17.27■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.25■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv3-3A0A0A6YWL2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.24■□□□□ 0.35
Ighv3-3A0A0A6YWL2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.23■□□□□ 0.35
Ighv3-3A0A0A6YWL2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv3-3A0A0A6YWL2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-3A0A0A6YWL2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.22■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-3A0A0A6YWL2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv3-3A0A0A6YWL2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.21■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.2■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.19■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv3-3A0A0A6YWL2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Particl-201ENSMUST00000205370 1560 ntBASIC17.17■□□□□ 0.34
Ighv3-3A0A0A6YWL2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Gm30023-201ENSMUST00000197970 889 ntBASIC17.16■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.16■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.16■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv3-3A0A0A6YWL2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv3-3A0A0A6YWL2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ighv3-3A0A0A6YWL2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.14■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ighv3-3A0A0A6YWL2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv3-3A0A0A6YWL2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv3-3A0A0A6YWL2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv3-3A0A0A6YWL2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv3-3A0A0A6YWL2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv3-3A0A0A6YWL2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv3-3A0A0A6YWL2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ighv3-3A0A0A6YWL2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv3-3A0A0A6YWL2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv3-3A0A0A6YWL2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.06■□□□□ 0.32
Ighv3-3A0A0A6YWL2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms