Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.18■□□□□ 0.98
Gm28557A0A087WQQ0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm28557A0A087WQQ0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm28557A0A087WQQ0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28557A0A087WQQ0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.17■□□□□ 0.98
Gm28557A0A087WQQ0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28557A0A087WQQ0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28557A0A087WQQ0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm28557A0A087WQQ0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Gm28557A0A087WQQ0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm28557A0A087WQQ0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm28557A0A087WQQ0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm28557A0A087WQQ0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm28557A0A087WQQ0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm28557A0A087WQQ0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm28557A0A087WQQ0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm28557A0A087WQQ0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm28557A0A087WQQ0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Gm28557A0A087WQQ0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28557A0A087WQQ0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.14■□□□□ 0.97
Gm28557A0A087WQQ0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28557A0A087WQQ0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28557A0A087WQQ0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28557A0A087WQQ0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28557A0A087WQQ0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28557A0A087WQQ0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28557A0A087WQQ0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm28557A0A087WQQ0 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.13■□□□□ 0.97
Gm28557A0A087WQQ0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm28557A0A087WQQ0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.13■□□□□ 0.97
Gm28557A0A087WQQ0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28557A0A087WQQ0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28557A0A087WQQ0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28557A0A087WQQ0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28557A0A087WQQ0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28557A0A087WQQ0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28557A0A087WQQ0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28557A0A087WQQ0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28557A0A087WQQ0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28557A0A087WQQ0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Gm28557A0A087WQQ0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.09■□□□□ 0.97
Gm28557A0A087WQQ0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm28557A0A087WQQ0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm28557A0A087WQQ0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm28557A0A087WQQ0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Gm28557A0A087WQQ0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28557A0A087WQQ0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28557A0A087WQQ0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28557A0A087WQQ0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28557A0A087WQQ0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28557A0A087WQQ0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Gm28557A0A087WQQ0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28557A0A087WQQ0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm28557A0A087WQQ0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm28557A0A087WQQ0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Gm28557A0A087WQQ0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Gm28557A0A087WQQ0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28557A0A087WQQ0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Gm28557A0A087WQQ0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28557A0A087WQQ0 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.05■□□□□ 0.96
Gm28557A0A087WQQ0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28557A0A087WQQ0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28557A0A087WQQ0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28557A0A087WQQ0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm28557A0A087WQQ0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm28557A0A087WQQ0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm28557A0A087WQQ0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm28557A0A087WQQ0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm28557A0A087WQQ0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm28557A0A087WQQ0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28557A0A087WQQ0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28557A0A087WQQ0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28557A0A087WQQ0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm28557A0A087WQQ0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21■□□□□ 0.95
Gm28557A0A087WQQ0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Gm28557A0A087WQQ0 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.99■□□□□ 0.95
Gm28557A0A087WQQ0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gm28557A0A087WQQ0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Gm28557A0A087WQQ0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.98■□□□□ 0.95
Gm28557A0A087WQQ0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28557A0A087WQQ0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28557A0A087WQQ0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28557A0A087WQQ0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.97■□□□□ 0.95
Gm28557A0A087WQQ0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28557A0A087WQQ0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28557A0A087WQQ0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.96■□□□□ 0.95
Gm28557A0A087WQQ0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Gm28557A0A087WQQ0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28557A0A087WQQ0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.95■□□□□ 0.94
Gm28557A0A087WQQ0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28557A0A087WQQ0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28557A0A087WQQ0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28557A0A087WQQ0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Gm28557A0A087WQQ0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm28557A0A087WQQ0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.94■□□□□ 0.94
Gm28557A0A087WQQ0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm28557A0A087WQQ0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.94■□□□□ 0.94
Gm28557A0A087WQQ0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gm28557A0A087WQQ0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm28557A0A087WQQ0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms