Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9d-3A0A075B695 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9d-3A0A075B695 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9d-3A0A075B695 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9d-3A0A075B695 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Trav9d-3A0A075B695 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9d-3A0A075B695 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav9d-3A0A075B695 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Trav9d-3A0A075B695 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav9d-3A0A075B695 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9d-3A0A075B695 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav9d-3A0A075B695 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9d-3A0A075B695 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9d-3A0A075B695 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9d-3A0A075B695 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9d-3A0A075B695 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9d-3A0A075B695 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav9d-3A0A075B695 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9d-3A0A075B695 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9d-3A0A075B695 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9d-3A0A075B695 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav9d-3A0A075B695 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9d-3A0A075B695 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9d-3A0A075B695 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9d-3A0A075B695 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav9d-3A0A075B695 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9d-3A0A075B695 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9d-3A0A075B695 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9d-3A0A075B695 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9d-3A0A075B695 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Trav9d-3A0A075B695 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trav9d-3A0A075B695 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9d-3A0A075B695 Gm30023-201ENSMUST00000197970 889 ntBASIC16.62■□□□□ 0.25
Trav9d-3A0A075B695 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav9d-3A0A075B695 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9d-3A0A075B695 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9d-3A0A075B695 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9d-3A0A075B695 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9d-3A0A075B695 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trav9d-3A0A075B695 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9d-3A0A075B695 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav9d-3A0A075B695 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-3A0A075B695 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-3A0A075B695 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav9d-3A0A075B695 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav9d-3A0A075B695 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-3A0A075B695 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-3A0A075B695 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav9d-3A0A075B695 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-3A0A075B695 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.59■□□□□ 0.25
Trav9d-3A0A075B695 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.59■□□□□ 0.25
Trav9d-3A0A075B695 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9d-3A0A075B695 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9d-3A0A075B695 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav9d-3A0A075B695 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
Trav9d-3A0A075B695 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9d-3A0A075B695 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9d-3A0A075B695 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9d-3A0A075B695 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9d-3A0A075B695 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9d-3A0A075B695 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9d-3A0A075B695 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-3A0A075B695 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav9d-3A0A075B695 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-3A0A075B695 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav9d-3A0A075B695 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-3A0A075B695 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-3A0A075B695 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-3A0A075B695 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-3A0A075B695 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-3A0A075B695 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav9d-3A0A075B695 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trav9d-3A0A075B695 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9d-3A0A075B695 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.55■□□□□ 0.24
Trav9d-3A0A075B695 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav9d-3A0A075B695 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9d-3A0A075B695 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav9d-3A0A075B695 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9d-3A0A075B695 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav9d-3A0A075B695 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav9d-3A0A075B695 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9d-3A0A075B695 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9d-3A0A075B695 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9d-3A0A075B695 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9d-3A0A075B695 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav9d-3A0A075B695 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9d-3A0A075B695 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav9d-3A0A075B695 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav9d-3A0A075B695 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.53■□□□□ 0.24
Trav9d-3A0A075B695 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9d-3A0A075B695 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trav9d-3A0A075B695 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9d-3A0A075B695 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9d-3A0A075B695 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9d-3A0A075B695 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9d-3A0A075B695 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9d-3A0A075B695 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9d-3A0A075B695 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9d-3A0A075B695 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9d-3A0A075B695 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms