Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav18A0A075B656 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav18A0A075B656 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav18A0A075B656 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trav18A0A075B656 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav18A0A075B656 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav18A0A075B656 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.21■□□□□ 0.67
Trav18A0A075B656 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav18A0A075B656 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.2■□□□□ 0.66
Trav18A0A075B656 Gm45855-201ENSMUST00000212546 880 ntBASIC19.2■□□□□ 0.66
Trav18A0A075B656 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav18A0A075B656 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav18A0A075B656 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav18A0A075B656 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav18A0A075B656 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav18A0A075B656 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav18A0A075B656 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav18A0A075B656 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav18A0A075B656 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trav18A0A075B656 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav18A0A075B656 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Trav18A0A075B656 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav18A0A075B656 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav18A0A075B656 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav18A0A075B656 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav18A0A075B656 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav18A0A075B656 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav18A0A075B656 Gm30023-201ENSMUST00000197970 889 ntBASIC19.15■□□□□ 0.66
Trav18A0A075B656 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav18A0A075B656 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Trav18A0A075B656 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav18A0A075B656 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav18A0A075B656 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.14■□□□□ 0.66
Trav18A0A075B656 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav18A0A075B656 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav18A0A075B656 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav18A0A075B656 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav18A0A075B656 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav18A0A075B656 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.13■□□□□ 0.65
Trav18A0A075B656 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav18A0A075B656 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav18A0A075B656 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav18A0A075B656 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav18A0A075B656 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav18A0A075B656 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.11■□□□□ 0.65
Trav18A0A075B656 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav18A0A075B656 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav18A0A075B656 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav18A0A075B656 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav18A0A075B656 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav18A0A075B656 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav18A0A075B656 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trav18A0A075B656 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trav18A0A075B656 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Trav18A0A075B656 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav18A0A075B656 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav18A0A075B656 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav18A0A075B656 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav18A0A075B656 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Trav18A0A075B656 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav18A0A075B656 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav18A0A075B656 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav18A0A075B656 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav18A0A075B656 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav18A0A075B656 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav18A0A075B656 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav18A0A075B656 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.06■□□□□ 0.64
Trav18A0A075B656 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav18A0A075B656 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav18A0A075B656 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.06■□□□□ 0.64
Trav18A0A075B656 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav18A0A075B656 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav18A0A075B656 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav18A0A075B656 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav18A0A075B656 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav18A0A075B656 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav18A0A075B656 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trav18A0A075B656 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trav18A0A075B656 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav18A0A075B656 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav18A0A075B656 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav18A0A075B656 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.03■□□□□ 0.64
Trav18A0A075B656 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.03■□□□□ 0.64
Trav18A0A075B656 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trav18A0A075B656 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav18A0A075B656 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav18A0A075B656 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav18A0A075B656 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav18A0A075B656 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav18A0A075B656 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Trav18A0A075B656 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trav18A0A075B656 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav18A0A075B656 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav18A0A075B656 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav18A0A075B656 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trav18A0A075B656 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav18A0A075B656 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav18A0A075B656 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav18A0A075B656 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trav18A0A075B656 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms