Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 VN1R25P-201ENST00000443385 738 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 NPM1P19-201ENST00000450070 712 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 ZNF886P-201ENST00000450781 723 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC018638.3-201ENST00000461273 132 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 RN7SL809P-201ENST00000482040 297 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 RN7SL570P-201ENST00000484405 292 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 RPL32P33-201ENST00000487023 394 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC109481.1-201ENST00000509173 282 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 RNU6-615P-201ENST00000516065 106 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 RNU6-311P-201ENST00000516224 102 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 RN7SKP283-201ENST00000517197 270 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 SNORA43.3-201ENST00000517240 103 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC139365.2-201ENST00000517972 253 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 IGKV2-19-201ENST00000518132 283 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC096996.1-201ENST00000563813 325 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 SNORD95-201ENST00000579879 68 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC115085.1-201ENST00000588924 229 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 HIRAP1-201ENST00000605318 787 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 FAM72A-208ENST00000607379 1139 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC010975.3-201ENST00000618727 978 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AC018926.3-201ENST00000618841 406 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AP001005.3-201ENST00000622049 129 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 CR392039.4-201ENST00000624968 501 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AL109659.3-201ENST00000624985 950 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 TTC41P-205ENST00000551270 3963 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AL118496.1-201ENST00000440201 1812 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AL159987.1-201ENST00000347911 293 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 SNORA64.1-201ENST00000362600 132 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 NCSTNP1-201ENST00000406229 144 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AL592310.1-201ENST00000414330 671 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 RNGTTP1-201ENST00000420965 728 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC099336.2-201ENST00000422457 254 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC009965.2-201ENST00000425328 970 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 NPM1P24-201ENST00000428039 894 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 GAPDHP48-201ENST00000436626 961 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 UBE2V1P5-201ENST00000440070 405 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC245047.2-201ENST00000441060 530 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC099560.2-201ENST00000457554 255 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 RPS23P2-201ENST00000463671 415 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC074087.1-201ENST00000512059 724 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 RN7SKP265-201ENST00000516448 223 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC021678.3-201ENST00000517893 476 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AP003080.1-202ENST00000526526 915 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 MTCO3P15-201ENST00000526563 574 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 IGBP1P1-201ENST00000554337 1009 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC022404.1-201ENST00000555320 273 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AP001002.2-201ENST00000625137 386 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AL445437.1-201ENST00000623157 3087 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC011933.2-201ENST00000578539 2790 ntBASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms