Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 RPS4XP16-201ENST00000427198 791 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 GSTA7P-201ENST00000438425 448 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 BTBD7P2-201ENST00000441962 620 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AC011753.3-201ENST00000443436 406 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 RPL7L1P1-201ENST00000448259 785 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AC104634.1-201ENST00000452720 462 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AL354710.1-201ENST00000453641 246 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 RAB9BP1-201ENST00000519581 626 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 DPRXP4-201ENST00000578053 568 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 MIR4737-201ENST00000583979 81 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AL161616.1-201ENST00000611867 286 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AC119674.1-212ENST00000641155 993 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.09□□□□□ -1.6
PCDHGA1Q9Y5H4 MAPK10-328ENST00000641553 4009 ntBASIC5.09□□□□□ -1.6
PCDHGA1Q9Y5H4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PCDHGA1Q9Y5H4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.09□□□□□ -1.6
PCDHGA1Q9Y5H4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PCDHGA1Q9Y5H4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PCDHGA1Q9Y5H4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
PCDHGA1Q9Y5H4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 AL445437.1-201ENST00000623157 3087 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 SDAD1P1-202ENST00000524156 2051 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 U3.3-201ENST00000362986 216 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 U3.10-201ENST00000364459 214 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 DBIP1-201ENST00000401435 260 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 NCSTNP1-201ENST00000406229 144 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 MIR1182-201ENST00000408363 97 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 RN7SKP247-201ENST00000411094 308 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 RPSAP35-201ENST00000413753 818 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 AL133482.1-201ENST00000415988 498 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 OR2AM1P-201ENST00000422137 422 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 PRPF38AP2-201ENST00000438179 851 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 CASP3P1-201ENST00000446037 609 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 AC243772.1-201ENST00000451620 410 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 CLIC4P1-201ENST00000453177 535 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 AL513533.1-201ENST00000453728 415 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 GLUD1P3-202ENST00000508551 200 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 IGKV1-32-201ENST00000519290 311 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 MIR4270-201ENST00000581799 70 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 AL133247.2-201ENST00000603236 482 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 AL023583.1-201ENST00000607518 1143 ntBASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA1Q9Y5H4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PCDHGA1Q9Y5H4 AL450326.2-201ENST00000421913 1962 ntBASIC5.07□□□□□ -1.6
PCDHGA1Q9Y5H4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms