Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RPS27AP18-201ENST00000515536 459 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 OR4V1P-201ENST00000525394 1140 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 SETP1-201ENST00000556014 845 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 NDUFB4P11-201ENST00000560510 395 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 MTCO2P22-201ENST00000603246 681 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC005021.1-201ENST00000608730 355 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 LINC01739-205ENST00000641890 573 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC073136.1-201ENST00000449426 2884 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC007996.1-201ENST00000620414 2821 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 MT-TP-201ENST00000387461 68 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 SNORA77-201ENST00000408716 125 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC093716.1-201ENST00000435923 377 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 TXNP5-201ENST00000441043 315 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC114878.1-201ENST00000441166 358 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC090114.3-201ENST00000479267 829 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 HMGN2P25-201ENST00000486956 268 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC004453.1-201ENST00000487895 408 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 RN7SL441P-201ENST00000492388 296 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 PCNAP1-201ENST00000505363 709 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 IGHV3-63-201ENST00000518422 341 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AL512310.9-201ENST00000553311 948 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC092868.3-201ENST00000560515 784 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC018552.1-201ENST00000562099 811 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC087763.1-201ENST00000603391 286 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC105254.2-201ENST00000603636 436 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC068870.2-201ENST00000620635 389 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 CASC19-222ENST00000641321 1173 ntBASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.78□□□□□ -1.64
ATG4BQ9Y4P1 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 NXF4-202ENST00000416098 1465 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 OR5T3-201ENST00000303059 1023 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 RNA5SP305-201ENST00000362665 119 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 RNU6-152P-201ENST00000384037 107 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AL136131.1-201ENST00000406079 803 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 DDX39BP1-205ENST00000422507 192 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AC007563.3-201ENST00000433233 371 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 RPL34P20-201ENST00000442771 351 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 CEACAMP7-201ENST00000444105 496 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 CYCSP24-201ENST00000445119 316 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AC073850.1-201ENST00000449243 255 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 MORF4L1P4-201ENST00000450245 976 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 IGHV5-78-201ENST00000450948 295 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AL133244.1-201ENST00000456007 258 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 RN7SL610P-201ENST00000463845 291 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AC093270.2-201ENST00000486157 792 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms