Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 NANOGP5-201ENST00000424456 877 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AC005189.1-201ENST00000431286 310 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 CFL1P1-202ENST00000432948 411 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AC099063.2-201ENST00000446360 662 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 Z95152.1-201ENST00000453556 656 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 RN7SL197P-201ENST00000466981 299 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 RPS7P6-201ENST00000485777 579 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AC093270.2-201ENST00000486157 792 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 NENFP3-201ENST00000503735 313 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 RN7SKP34-201ENST00000516142 244 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AC025811.1-201ENST00000604312 472 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AC009464.1-201ENST00000615731 469 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AP000676.4-201ENST00000624659 623 ntBASIC5.44□□□□□ -1.54
VPS4AQ9UN37 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS4AQ9UN37 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 RN7SKP115-201ENST00000363177 317 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 RN7SKP124-201ENST00000364730 341 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 MIR585-201ENST00000384887 94 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 ATF1P1-201ENST00000406040 927 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 OR51B3P-201ENST00000412287 913 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 TNPO1P1-201ENST00000423641 1138 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 CETN4P-201ENST00000432407 469 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 MTCYBP12-201ENST00000440559 1134 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 OR10R1P-201ENST00000441524 1141 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 EEF1B2P6-201ENST00000445713 673 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC023271.1-201ENST00000445936 1090 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC093166.2-201ENST00000455969 1017 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 RPS4XP12-201ENST00000461747 709 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 RPS23P2-201ENST00000463671 415 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC138866.2-201ENST00000508650 584 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 BTG4P1-201ENST00000510421 183 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC112673.1-201ENST00000513168 575 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC013701.1-201ENST00000522657 465 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 IGLV3-30-201ENST00000524362 298 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AP003717.3-201ENST00000544832 1180 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC068993.1-201ENST00000546724 589 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 HAUS8P1-201ENST00000549005 542 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC015802.2-201ENST00000589690 189 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC006272.2-201ENST00000594725 163 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC022022.2-201ENST00000602989 360 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC015660.5-201ENST00000623238 564 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC104985.3-201ENST00000623479 597 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC019226.2-201ENST00000625973 424 ntBASIC5.43□□□□□ -1.54
VPS4AQ9UN37 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4AQ9UN37 AC087565.3-203ENST00000641018 837 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms