Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.96□□□□□ -1.46
COL20A1Q9P218 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL20A1Q9P218 AC131971.1-201ENST00000332881 1482 ntBASIC5.96□□□□□ -1.46
COL20A1Q9P218 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
COL20A1Q9P218 BX284613.1-201ENST00000452221 1641 ntBASIC5.96□□□□□ -1.46
COL20A1Q9P218 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL20A1Q9P218 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.95□□□□□ -1.46
COL20A1Q9P218 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
COL20A1Q9P218 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
COL20A1Q9P218 AC092681.1-201ENST00000297369 291 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL20A1Q9P218 RNU5B-4P-201ENST00000363508 111 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 RN7SKP17-201ENST00000411242 351 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 AL590806.1-201ENST00000415818 853 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 MTCO2P23-201ENST00000425216 680 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL20A1Q9P218 AC021876.1-201ENST00000425959 359 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 USP12PY-201ENST00000427677 1064 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 FO393414.1-201ENST00000428697 1184 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 AC124944.2-201ENST00000429866 1242 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 RPS27P18-201ENST00000431701 247 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.95□□□□□ -1.46
COL20A1Q9P218 HMGB3P10-201ENST00000434734 572 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 VN1R54P-201ENST00000435210 1049 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 TPT1P1-201ENST00000458495 518 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL20A1Q9P218 AC107398.1-201ENST00000486904 505 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.95□□□□□ -1.46
COL20A1Q9P218 AC025459.1-201ENST00000504072 156 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 NDUFB5P1-201ENST00000508134 564 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 AP003717.3-201ENST00000544832 1180 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 AC009597.2-201ENST00000604659 592 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 AC079610.2-201ENST00000604818 690 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.95□□□□□ -1.46
COL20A1Q9P218 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.95□□□□□ -1.46
COL20A1Q9P218 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL20A1Q9P218 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL20A1Q9P218 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
COL20A1Q9P218 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.95□□□□□ -1.46
COL20A1Q9P218 AC016745.2-201ENST00000608834 3443 ntBASIC5.95□□□□□ -1.46
COL20A1Q9P218 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL20A1Q9P218 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 AL355488.2-201ENST00000609909 2850 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL20A1Q9P218 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL20A1Q9P218 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC103591.2-201ENST00000265259 766 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL20A1Q9P218 RNU6-298P-201ENST00000390888 96 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 ATP5HP3-201ENST00000396994 486 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 AL445183.3-201ENST00000414168 502 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 HSPE1P16-201ENST00000426640 348 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL20A1Q9P218 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL20A1Q9P218 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL20A1Q9P218 AL359265.1-201ENST00000440296 795 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 RPL34P20-201ENST00000442771 351 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 DNAJB5P1-201ENST00000454004 806 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC097484.1-201ENST00000471148 389 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 AP000797.2-201ENST00000475768 606 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC093815.1-201ENST00000508637 280 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC012400.1-201ENST00000518452 381 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC136777.2-201ENST00000522979 358 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 OR8Q1P-201ENST00000526467 655 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 AL049830.4-201ENST00000555149 351 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 AL606834.3-201ENST00000602615 496 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC093799.2-201ENST00000610062 578 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 MIR6133-201ENST00000617057 108 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC109809.1-201ENST00000619665 545 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC132825.7-201ENST00000638744 335 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL20A1Q9P218 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL20A1Q9P218 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL20A1Q9P218 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL20A1Q9P218 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 AC083837.1-201ENST00000565297 2994 ntBASIC5.94□□□□□ -1.46
COL20A1Q9P218 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL20A1Q9P218 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL20A1Q9P218 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms