Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AC006512.2-201ENST00000543250 486 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 MIR6806-201ENST00000622141 64 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AC004232.3-201ENST00000622977 525 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AC055839.1-201ENST00000634467 498 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AC009643.2-201ENST00000603543 1448 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 OR13C1P-202ENST00000641378 2919 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 RNU1-20P-201ENST00000363314 162 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 RNA5SP335-201ENST00000363817 110 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 RNU6-883P-201ENST00000384597 107 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 OR6E1P-201ENST00000414424 923 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 PDSS1P1-201ENST00000422953 1114 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 RGS17P1-201ENST00000423358 553 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 MTND4LP7-201ENST00000431728 294 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC069154.1-201ENST00000432914 542 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC016724.1-201ENST00000453215 421 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC018638.3-201ENST00000461273 132 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 RN7SL41P-201ENST00000476144 297 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 NIP7P2-201ENST00000485801 544 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 RN7SL170P-201ENST00000487098 295 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 RPL37P23-201ENST00000492641 294 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC138866.2-201ENST00000508650 584 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 RNU6-467P-201ENST00000517027 110 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 MTND2P13-201ENST00000577438 1039 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 RPL26P30-202ENST00000602923 645 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC133552.5-201ENST00000604266 540 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 BX323046.1-201ENST00000610145 535 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 RPSAP73-201ENST00000614820 330 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC009032.1-201ENST00000617574 431 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AL590410.1-201ENST00000617925 333 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC012414.7-202ENST00000622705 1090 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC091046.3-201ENST00000631455 1574 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 AC017104.4-201ENST00000636283 1592 ntBASIC4.76□□□□□ -1.65
NDE1Q9NXR1 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
NDE1Q9NXR1 IRF5P1-201ENST00000504852 2164 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms