Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNU6-452P-201ENST00000384406 107 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 MIR513B-201ENST00000385136 84 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 Y_RNA.578-201ENST00000390903 88 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 AC104297.1-201ENST00000393779 870 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 AL645927.1-201ENST00000396783 406 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 RPS3AP37-201ENST00000419176 745 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 KRR1P1-201ENST00000419430 803 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 OR2X1P-201ENST00000421144 687 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 RPS3AP38-201ENST00000435889 763 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 Z83846.1-201ENST00000446798 265 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 FAR2P1-206ENST00000449736 709 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 RPS6P2-201ENST00000454208 705 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 RPL15P21-201ENST00000495592 567 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 MTCYBP35-201ENST00000503630 1137 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 AC008565.1-201ENST00000509046 885 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 HMGN2P6-201ENST00000551091 273 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 ATP5F1P7-201ENST00000567330 760 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 SS18L2P2-201ENST00000583960 235 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 BNIP3P24-201ENST00000593398 557 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 AC008751.2-201ENST00000597885 980 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 AL513327.3-201ENST00000602618 469 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 AC004948.1-201ENST00000609858 672 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 AL139407.1-201ENST00000613826 1175 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 AC231759.1-201ENST00000616455 597 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VTA1Q9NP79 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VTA1Q9NP79 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VTA1Q9NP79 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VTA1Q9NP79 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VTA1Q9NP79 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
VTA1Q9NP79 RNU4-92P-201ENST00000363783 136 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 RNU6-224P-201ENST00000384055 107 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 RNA5SP339-201ENST00000390987 122 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 AL009179.1-201ENST00000406085 265 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 FCF1P5-201ENST00000406490 482 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 VTA1P1-201ENST00000414044 866 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 RNF10P1-201ENST00000418589 369 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 AC010099.3-201ENST00000423896 409 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 AC004022.1-201ENST00000447766 1066 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 AURKAPS1-201ENST00000451805 1212 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VTA1Q9NP79 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 RPS12P31-201ENST00000491419 398 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 DEFB130C-202ENST00000530001 230 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 OR5AM1P-201ENST00000532136 1032 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 AC145350.1-201ENST00000567426 208 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VTA1Q9NP79 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 AC007342.8-201ENST00000623278 678 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 AC011815.3-201ENST00000624194 473 ntBASIC6.27□□□□□ -1.41
VTA1Q9NP79 AP002967.1-201ENST00000624203 539 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms