Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC023310.2-201ENST00000553844 547 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 BNIP3P26-201ENST00000600827 554 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AP000238.1-201ENST00000608759 426 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AC006924.1-201ENST00000610750 559 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AC025594.3-201ENST00000613068 790 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AL121873.1-201ENST00000616013 524 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 MIR7159-201ENST00000620587 66 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AL356596.1-201ENST00000624230 379 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
SEC61A2Q9H9S3 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC007998.4-201ENST00000612496 2533 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 Z83820.1-201ENST00000456978 1499 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC138393.1-206ENST00000540997 1886 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 RNA5SP232-201ENST00000364144 119 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 LINC01347-201ENST00000417964 355 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 CYCSP46-201ENST00000423569 204 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 OSTCP4-201ENST00000424397 449 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AL139158.1-201ENST00000424719 340 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 MTND3P23-201ENST00000431980 347 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC241584.1-201ENST00000438469 1241 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC098614.3-201ENST00000438957 440 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC005002.1-201ENST00000447458 540 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC103563.5-201ENST00000455643 364 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC104339.1-201ENST00000465478 348 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC116337.2-201ENST00000477662 156 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC073358.1-201ENST00000505671 684 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 OR51A1P-201ENST00000511110 946 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC109471.1-201ENST00000511631 612 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC008507.1-201ENST00000587506 734 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC005332.4-201ENST00000592752 579 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC103881.1-201ENST00000603476 538 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC119501.1-201ENST00000603646 475 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 LSM1P2-201ENST00000604911 322 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC091946.2-201ENST00000606105 291 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC072046.2-201ENST00000618366 268 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC005840.5-201ENST00000619166 599 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 AC116667.2-201ENST00000641075 823 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 SHQ1P1-201ENST00000437111 1544 ntBASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms