Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ABL2-211ENST00000512653 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 EHMT1-240ENST00000637318 2983 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 PNPLA1-202ENST00000388715 2332 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AP002008.3-201ENST00000528614 2587 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 EFL1-202ENST00000359445 3470 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 EXD2-205ENST00000409675 2828 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 MTO1-205ENST00000415954 2837 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 APOL1-206ENST00000426053 2808 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL390728.1-201ENST00000397642 1941 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 NRAV-201ENST00000500741 1901 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 EARS2-201ENST00000449606 3961 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CYB561A3-201ENST00000294072 3061 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 PPRC1-202ENST00000370012 2163 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 C5orf66-AS2-201ENST00000505663 2162 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 GUCD1-213ENST00000621833 3584 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 UTP14A-202ENST00000425117 2403 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RFPL4AL1-201ENST00000341750 908 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 OR51D1-201ENST00000357605 1124 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SFTA2-201ENST00000359086 451 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 FGF1-203ENST00000360966 695 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC25A14-203ENST00000361980 969 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR210-201ENST00000362168 110 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S12-201ENST00000362400 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S11-201ENST00000362464 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S3-201ENST00000362467 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S1-201ENST00000362482 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S5-201ENST00000362526 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S10-201ENST00000363040 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S8-201ENST00000363473 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-511P-201ENST00000363496 107 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S17-201ENST00000363500 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S4-201ENST00000363511 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S6-201ENST00000363754 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 Y_RNA.213-201ENST00000364178 111 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5SP202-201ENST00000364315 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 Y_RNA.229-201ENST00000364347 113 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S14-201ENST00000364485 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S2-201ENST00000364718 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 Y_RNA.293-201ENST00000364908 93 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S15-201ENST00000365055 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-715P-201ENST00000365204 103 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 Y_RNA.344-201ENST00000365381 112 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S16-201ENST00000365387 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S7-201ENST00000365651 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5S13-201ENST00000365656 119 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CENPW-201ENST00000368325 528 ntTSL 3 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 LCN1-202ENST00000371781 764 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 DEFA1-202ENST00000382692 485 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AMELY-202ENST00000383036 621 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-1316P-201ENST00000384242 108 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR135A2-201ENST00000384854 100 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 TRBV6-8-201ENST00000390376 341 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 TRBV7-5-201ENST00000390382 345 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 GEMIN2-203ENST00000396249 801 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 KRTAP12-3-201ENST00000397907 410 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 MAP3K7CL-204ENST00000399925 692 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL451074.1-201ENST00000400982 1216 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 GSTA12P-201ENST00000402398 508 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL355497.1-201ENST00000406262 551 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 STK16-205ENST00000409743 1069 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-380P-201ENST00000410207 107 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 HMGN1P24-201ENST00000412282 298 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL135786.1-201ENST00000415892 214 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 NDUFB4P3-201ENST00000418418 390 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL022100.1-202ENST00000421214 548 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 ASS1P7-201ENST00000423174 1226 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 PUDPP2-201ENST00000431423 643 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL390786.1-201ENST00000432108 309 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AC073873.1-201ENST00000433950 276 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 WDR82P1-201ENST00000439836 939 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 MTATP6P21-201ENST00000440681 189 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RPS26P30-201ENST00000443431 335 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL451074.4-201ENST00000447545 470 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 OR7H1P-201ENST00000448965 922 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 FTLP18-201ENST00000453860 523 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 DDX39A-203ENST00000454233 922 ntTSL 3 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL391825.1-202ENST00000458136 741 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AC069454.1-201ENST00000465845 468 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AC104563.1-201ENST00000476147 376 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms