Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 SNORD51.1-201ENST00000365405 77 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 PPIAP9-201ENST00000403866 498 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 NUDT19P3-201ENST00000404698 555 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 BX510359.3-201ENST00000422168 306 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AL161722.2-201ENST00000434731 981 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AL359265.1-201ENST00000440296 795 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 CNOT7P2-201ENST00000441051 832 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AC006511.1-201ENST00000470614 315 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 SNRPCP2-201ENST00000504370 475 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AP002812.4-201ENST00000532139 286 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AC006453.5-201ENST00000636451 619 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 ZNF90P1-201ENST00000480493 1951 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AC100757.1-201ENST00000616872 1835 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 AC008079.2-201ENST00000623543 20396 ntBASIC6.87□□□□□ -1.31
CHMP4AQ9BY43 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 IGKV7-3-201ENST00000357453 298 ntBASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 SNORA16A-201ENST00000384342 137 ntBASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 HMGB1P10-201ENST00000395823 563 ntBASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 RBM22P1-201ENST00000578589 1214 ntBASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 AC005242.1-201ENST00000585658 438 ntBASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 AC017076.1-201ENST00000607613 578 ntBASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 AC126915.2-201ENST00000610957 190 ntBASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4AQ9BY43 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 METTL21EP-201ENST00000298105 713 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 SNORA17.1-201ENST00000362945 126 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 MIR1178-201ENST00000408396 91 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 RPS4XP16-201ENST00000427198 791 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 GAPDHP14-201ENST00000450472 937 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 HMGB3P21-201ENST00000452483 547 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 AL035090.1-201ENST00000454835 332 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 Z92846.1-201ENST00000456203 268 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 AC104687.1-201ENST00000485829 412 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 RN7SL284P-201ENST00000498823 275 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 HIGD1AP14-201ENST00000507617 282 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 OR11H3P-201ENST00000554547 982 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 AC027176.2-201ENST00000559166 746 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 NMNAT1P5-201ENST00000559657 841 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 RPL10P14-201ENST00000565265 298 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 AC009597.2-201ENST00000604659 592 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 AC244107.2-201ENST00000611773 76 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 AC015726.3-201ENST00000624501 418 ntBASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 CR392039.4-201ENST00000624968 501 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms