Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC091133.5-201ENST00000603088 301 ntBASIC7□□□□□ -1.29
COL25A1Q9BXS0 AC023513.1-201ENST00000604396 691 ntBASIC7□□□□□ -1.29
COL25A1Q9BXS0 AC104237.2-201ENST00000612456 443 ntBASIC7□□□□□ -1.29
COL25A1Q9BXS0 AL049541.2-201ENST00000626377 555 ntBASIC7□□□□□ -1.29
COL25A1Q9BXS0 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7□□□□□ -1.29
COL25A1Q9BXS0 AC093591.3-201ENST00000634516 308 ntBASIC7□□□□□ -1.29
COL25A1Q9BXS0 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7□□□□□ -1.29
COL25A1Q9BXS0 AC108099.1-201ENST00000564402 3258 ntBASIC7□□□□□ -1.29
COL25A1Q9BXS0 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL25A1Q9BXS0 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
COL25A1Q9BXS0 GJA5-202ENST00000579774 3181 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL25A1Q9BXS0 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
COL25A1Q9BXS0 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL25A1Q9BXS0 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL25A1Q9BXS0 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL25A1Q9BXS0 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL25A1Q9BXS0 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7□□□□□ -1.29
COL25A1Q9BXS0 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC7□□□□□ -1.29
COL25A1Q9BXS0 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC7□□□□□ -1.29
COL25A1Q9BXS0 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL25A1Q9BXS0 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7□□□□□ -1.29
COL25A1Q9BXS0 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL25A1Q9BXS0 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL25A1Q9BXS0 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
COL25A1Q9BXS0 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC132825.1-201ENST00000463573 2247 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 CASC19-246ENST00000641625 1606 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 Y_RNA.149-201ENST00000363558 117 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 Y_RNA.257-201ENST00000364596 102 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 RNU6-359P-201ENST00000365466 108 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 RNU6-74P-201ENST00000384235 107 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AL121977.1-201ENST00000401636 979 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AL162578.1-201ENST00000406202 378 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 NPM1P40-201ENST00000412758 733 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 MTCO2P27-201ENST00000420740 428 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 PMCHL1-202ENST00000423102 261 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AL445669.1-201ENST00000426743 755 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 HMGB1P18-201ENST00000438801 619 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 MTND6P13-201ENST00000443510 523 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC098847.1-201ENST00000473094 348 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 RPL5P12-201ENST00000477071 851 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 GM2AP2-201ENST00000491764 562 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC087241.2-201ENST00000535801 324 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC079598.4-201ENST00000549647 265 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC022404.1-201ENST00000555320 273 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC055876.1-202ENST00000567053 138 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 MRPS21P8-201ENST00000569196 235 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 MIR1269B-201ENST00000580405 75 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 MIR4697-201ENST00000582977 78 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AL589674.2-201ENST00000604304 337 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC068722.2-201ENST00000618734 544 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC138649.5-201ENST00000637456 137 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 VN2R3P-201ENST00000422626 1412 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AL022163.1-201ENST00000430261 1569 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 LRRC37A9P-201ENST00000603850 5376 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 AC097634.1-201ENST00000604491 2467 ntBASIC6.99□□□□□ -1.29
COL25A1Q9BXS0 HSPD1P4-201ENST00000547203 1702 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 TAB3P1-202ENST00000452645 1634 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms