Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC006210.2-201ENST00000367074 1545 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC090181.3-201ENST00000624777 1514 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AP003486.1-201ENST00000525716 3994 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC083806.2-201ENST00000617795 2685 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC010132.2-201ENST00000295493 1043 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 OR11H13P-201ENST00000359695 979 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 Y_RNA.450-201ENST00000384198 113 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 RNU1-46P-201ENST00000384425 164 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 MIR142-201ENST00000384835 87 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 FCF1P10-201ENST00000407590 479 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC066692.1-201ENST00000421721 457 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 MTND5P14-201ENST00000441481 1267 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC097359.1-201ENST00000447946 463 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 MTND1P16-201ENST00000465177 898 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 UBTFL6-201ENST00000477929 1024 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC005017.1-201ENST00000482002 490 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 RPL7P24-201ENST00000493052 752 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC025459.1-201ENST00000504072 156 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 GUSBP9-201ENST00000510138 584 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 ARL2BPP6-201ENST00000512757 439 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC010342.1-201ENST00000514047 877 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 IGLV3-6-201ENST00000523937 250 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 BPTFP1-201ENST00000579209 492 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AP005119.2-201ENST00000579735 1105 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 UBE2V2P2-201ENST00000587677 504 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC063977.7-201ENST00000594454 337 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AL589863.1-201ENST00000595383 631 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AL078623.1-201ENST00000602702 907 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AP000238.1-201ENST00000608759 426 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AP000894.4-201ENST00000610185 483 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC009033.1-201ENST00000624279 431 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 AC010325.3-201ENST00000641084 394 ntBASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSBP3Q9BWW4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC009779.8-201ENST00000641684 4384 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms