Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 SMG1P6-201ENST00000532337 2930 ntBASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 GLULP6-201ENST00000399502 913 ntBASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 RNA5SP345-201ENST00000410646 108 ntBASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 RPL18P10-201ENST00000425606 538 ntBASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AC009963.2-201ENST00000453431 138 ntBASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 RN7SL354P-201ENST00000469282 294 ntBASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 SCARNA22-201ENST00000503991 125 ntBASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 RNU6-964P-201ENST00000516524 69 ntBASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AC034205.1-201ENST00000520621 638 ntBASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 OOSP1P2-201ENST00000579644 351 ntBASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AC098935.2-201ENST00000604222 466 ntBASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AC022106.2-201ENST00000620114 757 ntBASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 AL132640.2-201ENST00000559968 1698 ntBASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPAP1Q9BWH6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 AC104260.2-201ENST00000623551 3497 ntBASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 ZNF652P1-201ENST00000442420 1309 ntBASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 AC069213.2-201ENST00000420238 366 ntBASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 RPL36AP10-201ENST00000421785 322 ntBASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 NRBF2P3-201ENST00000432731 865 ntBASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 RHEBP2-201ENST00000450289 600 ntBASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 SOX5P1-201ENST00000524155 1127 ntBASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 AP001880.2-201ENST00000538233 448 ntBASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 AC083809.1-201ENST00000615051 472 ntBASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 AC019206.1-201ENST00000621938 425 ntBASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 DHX9P1-201ENST00000436565 3076 ntBASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.88□□□□□ -1.47
RPAP1Q9BWH6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 RSU1P3-201ENST00000412878 835 ntBASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 AC114755.2-201ENST00000413520 361 ntBASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 AL645608.4-201ENST00000423619 154 ntBASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 CNOT7P1-201ENST00000429006 852 ntBASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 AC005154.2-201ENST00000438110 379 ntBASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 AL591473.1-201ENST00000464297 313 ntBASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 AC068587.1-201ENST00000483613 781 ntBASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 AC074050.1-201ENST00000563247 211 ntBASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 AC010424.2-201ENST00000607594 443 ntBASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 BNIP3P41-202ENST00000616656 861 ntBASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 AL121839.2-201ENST00000565058 6943 ntBASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 MTCO1P7-201ENST00000419523 1542 ntBASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 DHX40P1-201ENST00000588725 1412 ntBASIC5.87□□□□□ -1.47
RPAP1Q9BWH6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms