Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AL645608.4-201ENST00000423619 154 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC42Q96M95 AC093414.1-201ENST00000434712 514 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 PRPF38AP2-201ENST00000438179 851 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 RPL7L1P1-201ENST00000448259 785 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 AURKAPS1-201ENST00000451805 1212 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 AC234781.3-201ENST00000452540 973 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 COPS8P2-201ENST00000473228 627 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 RPL23AP65-201ENST00000475608 468 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 RN7SL214P-201ENST00000487317 265 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 ATP5LP3-201ENST00000514223 304 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 AC021733.2-201ENST00000518830 497 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 BUD31P1-201ENST00000521828 359 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC42Q96M95 AC022832.1-201ENST00000530718 645 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 AC084759.1-201ENST00000561168 290 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC42Q96M95 RN7SL802P-201ENST00000577858 299 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 MIR5699-201ENST00000578903 90 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC42Q96M95 AC022726.1-201ENST00000587475 207 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 AP000864.1-201ENST00000609424 650 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC42Q96M95 AC074140.1-201ENST00000621617 208 ntBASIC5.07□□□□□ -1.6
CCDC42Q96M95 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC42Q96M95 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC42Q96M95 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC42Q96M95 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC42Q96M95 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC42Q96M95 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC42Q96M95 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC42Q96M95 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCDC42Q96M95 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CCDC42Q96M95 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC42Q96M95 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC42Q96M95 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC42Q96M95 RPL23P2-201ENST00000320371 421 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CCDC42Q96M95 RNA5SP372-201ENST00000390836 115 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC42Q96M95 AC233289.1-201ENST00000403700 508 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 AP000534.2-201ENST00000412729 568 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 RANP7-201ENST00000418085 644 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC42Q96M95 RN7SL41P-201ENST00000476144 297 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 AC108022.1-201ENST00000493466 478 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 HIGD1AP14-201ENST00000507617 282 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC42Q96M95 RNU1-6P-201ENST00000516290 144 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 AC133555.2-201ENST00000550213 292 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC42Q96M95 AC090888.3-201ENST00000558917 509 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC42Q96M95 AC020910.3-201ENST00000603701 874 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 AC073575.2-201ENST00000614212 627 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 AF117829.2-201ENST00000619538 361 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 LINC01739-205ENST00000641890 573 ntBASIC5.06□□□□□ -1.6
CCDC42Q96M95 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC42Q96M95 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC42Q96M95 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC42Q96M95 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC42Q96M95 UGT2B26P-201ENST00000508672 1613 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 AL031119.1-201ENST00000404707 1879 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC42Q96M95 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC42Q96M95 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC42Q96M95 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC42Q96M95 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CCDC42Q96M95 AL589647.1-201ENST00000402485 466 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 RPL21P108-201ENST00000413857 481 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 GLUD1P9-201ENST00000420997 1173 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 AC004448.2-201ENST00000422360 586 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 AC005033.1-201ENST00000428904 813 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 CNOT7P2-201ENST00000441051 832 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC42Q96M95 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC42Q96M95 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC42Q96M95 RN7SKP66-201ENST00000516681 231 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC42Q96M95 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC42Q96M95 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC42Q96M95 RN7SL52P-201ENST00000584271 284 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 HMGB2P1-201ENST00000591146 634 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC42Q96M95 AC026979.4-201ENST00000606555 645 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 OR7M1P-201ENST00000608946 533 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 EIF3FP1-201ENST00000613970 806 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC42Q96M95 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC42Q96M95 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC42Q96M95 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CCDC42Q96M95 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC42Q96M95 CDC27P2-201ENST00000425026 1922 ntBASIC5.05□□□□□ -1.6
CCDC42Q96M95 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CCDC42Q96M95 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC42Q96M95 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
CCDC42Q96M95 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CCDC42Q96M95 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC42Q96M95 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC42Q96M95 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms