Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 AL590762.2-201ENST00000395798 571 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 CEACAMP8-201ENST00000413902 580 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 TPT1P3-201ENST00000492841 512 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 FAM27B-201ENST00000610601 213 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 AC004777.1-201ENST00000624317 287 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 RNU1-94P-201ENST00000362627 173 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 RNA5SP187-201ENST00000384400 119 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 RPS3AP25-201ENST00000411660 793 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 AC093578.1-201ENST00000415219 368 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 RRM2P4-201ENST00000441721 562 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 PSMB7P1-201ENST00000556349 514 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 AP001160.4-201ENST00000596971 382 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 RPL23AP2-201ENST00000471227 466 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 IGBP1P4-201ENST00000503202 879 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 MTCO1P49-201ENST00000523429 802 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 AL023881.1-201ENST00000621088 301 ntBASIC3.19□□□□□ -1.9
ALMS1Q8TCU4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC093849.1-201ENST00000563631 2209 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 RN7SKP202-201ENST00000410439 330 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 RN7SKP33-201ENST00000410942 340 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 RN7SKP17-201ENST00000411242 351 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AL500522.2-201ENST00000448562 343 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC005412.2-201ENST00000492004 341 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC027216.1-201ENST00000577726 685 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 MIR3200-201ENST00000580767 85 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC090506.2-201ENST00000624521 419 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC011447.7-201ENST00000624228 1590 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 OR1F12-201ENST00000402365 945 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 SNORA11.1-201ENST00000408133 129 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC093249.4-201ENST00000564755 259 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 AC010424.2-201ENST00000607594 443 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms