Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 U3.3-201ENST00000362986 216 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 RNU1-146P-201ENST00000364015 165 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 MT-TP-201ENST00000387461 68 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC093162.1-201ENST00000419682 124 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC099670.2-201ENST00000435130 321 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 RPS29P10-201ENST00000439197 166 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AL157827.1-201ENST00000447622 132 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC073850.1-201ENST00000449243 255 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC079168.1-201ENST00000458741 345 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 RN7SL197P-201ENST00000466981 299 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 BX284632.1-201ENST00000478218 541 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC109462.1-201ENST00000491087 368 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 PPM1AP1-201ENST00000502740 1135 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 BTG4P1-201ENST00000510421 183 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC023158.1-201ENST00000561632 1025 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AP005229.2-201ENST00000609980 697 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC092070.2-203ENST00000598377 3644 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 AC007382.1-201ENST00000624376 2618 ntBASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SCN4BQ8IWT1 VPS35P1-201ENST00000563400 1518 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AL606537.1-201ENST00000607258 2011 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AC004158.1-201ENST00000564508 4319 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 OR8V1P-201ENST00000395193 873 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 VN1R42P-201ENST00000424651 344 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 CLUHP1-201ENST00000435012 1190 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AL096829.2-201ENST00000446582 742 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 CALM1P2-201ENST00000452941 448 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AC008379.1-201ENST00000463655 464 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 RN7SL329P-201ENST00000467740 299 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AC090114.3-201ENST00000479267 829 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 RN7SL826P-201ENST00000479724 288 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AC022133.1-201ENST00000490961 571 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 HAUS1P1-201ENST00000505275 832 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 IGHV3-63-201ENST00000518422 341 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AC104115.2-201ENST00000523026 687 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AC092490.3-201ENST00000545370 572 ntBASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN4BQ8IWT1 RN7SL708P-201ENST00000580952 299 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms