Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 SAMMSON-213ENST00000641336 1521 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 ADAM5-202ENST00000399789 1942 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC091305.2-201ENST00000624049 1576 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC38Q502W7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC38Q502W7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC092079.1-201ENST00000558620 1985 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC38Q502W7 HSPD1P14-201ENST00000432666 1618 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC38Q502W7 GAPDHP24-201ENST00000328713 983 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC38Q502W7 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC233289.1-201ENST00000403700 508 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC38Q502W7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 OR13Z1P-201ENST00000416141 834 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 HSFY1P1-201ENST00000423928 1178 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 SEC63P1-201ENST00000425785 1258 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 RPL7P56-201ENST00000429441 717 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC38Q502W7 RPL34P6-201ENST00000432390 345 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 RPL7P45-201ENST00000455851 743 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 GTF2IP12-201ENST00000456547 356 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 RNA5SP103-201ENST00000459503 118 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 NDUFA5P5-201ENST00000468361 342 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC094085.1-201ENST00000468914 584 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC022215.1-201ENST00000481770 362 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 AL049874.2-201ENST00000492636 288 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 NENFP3-201ENST00000503735 313 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC011611.5-201ENST00000552477 578 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 POLR2KP1-201ENST00000553226 168 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC027104.1-201ENST00000563702 681 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 DPPA2P4-201ENST00000563717 878 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 AL391001.1-201ENST00000602747 715 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC009237.13-201ENST00000603193 276 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC112503.1-201ENST00000608436 391 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 AL122125.1-201ENST00000616999 600 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC129915.3-201ENST00000634128 948 ntBASIC5.68□□□□□ -1.5
CCDC38Q502W7 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC38Q502W7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC38Q502W7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC38Q502W7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC38Q502W7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC38Q502W7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC38Q502W7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC38Q502W7 AC027228.2-201ENST00000567141 2154 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC38Q502W7 RNU5B-4P-201ENST00000363508 111 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC38Q502W7 RNA5SP122-201ENST00000384457 108 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 OR7E101P-201ENST00000400428 513 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 RPSAP35-201ENST00000413753 818 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 PTP4A1P7-201ENST00000423476 514 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 FABP5P3-201ENST00000437960 408 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 MED6P1-201ENST00000439659 713 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 FHP1-201ENST00000442741 703 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC38Q502W7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 RPL23AP12-201ENST00000467573 473 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 RPL7P40-201ENST00000481703 745 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 RN7SL423P-201ENST00000486202 304 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 AC021106.1-201ENST00000509020 1058 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms