Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC126177.5-201ENST00000549599 178 ntBASIC3.67□□□□□ -1.82
CCL20P78556 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCL20P78556 AC026826.3-201ENST00000561747 158 ntBASIC3.67□□□□□ -1.82
CCL20P78556 CYP4A43P-201ENST00000568156 121 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.67□□□□□ -1.82
CCL20P78556 AC091178.1-203ENST00000584586 279 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.67□□□□□ -1.82
CCL20P78556 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.67□□□□□ -1.82
CCL20P78556 AL137072.1-201ENST00000603444 466 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AL121873.1-201ENST00000616013 524 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AL138721.1-201ENST00000616756 179 ntBASIC3.67□□□□□ -1.82
CCL20P78556 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AC074276.2-201ENST00000619891 348 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCL20P78556 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.67□□□□□ -1.82
CCL20P78556 AL136164.3-201ENST00000624429 3978 ntBASIC3.67□□□□□ -1.82
CCL20P78556 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.67□□□□□ -1.82
CCL20P78556 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CCL20P78556 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.67□□□□□ -1.82
CCL20P78556 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCL20P78556 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.66□□□□□ -1.82
CCL20P78556 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CCL20P78556 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCL20P78556 AC011266.1-201ENST00000624119 3569 ntBASIC3.66□□□□□ -1.82
CCL20P78556 SMG1P6-201ENST00000532337 2930 ntBASIC3.66□□□□□ -1.82
CCL20P78556 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCL20P78556 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.66□□□□□ -1.82
CCL20P78556 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCL20P78556 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCL20P78556 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCL20P78556 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCL20P78556 EEF1B2P8-201ENST00000414101 671 ntBASIC3.66□□□□□ -1.82
CCL20P78556 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.66□□□□□ -1.82
CCL20P78556 RPS12P5-201ENST00000423449 371 ntBASIC3.66□□□□□ -1.82
CCL20P78556 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.66□□□□□ -1.82
CCL20P78556 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC3.66□□□□□ -1.82
CCL20P78556 CYCSP6-201ENST00000434498 302 ntBASIC3.66□□□□□ -1.82
CCL20P78556 AC012075.1-201ENST00000436549 580 ntBASIC3.66□□□□□ -1.82
CCL20P78556 AC110602.1-201ENST00000437414 318 ntBASIC3.66□□□□□ -1.82
CCL20P78556 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.66□□□□□ -1.82
CCL20P78556 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.66□□□□□ -1.82
CCL20P78556 SCARNA10-201ENST00000459255 330 ntBASIC3.66□□□□□ -1.82
CCL20P78556 RPL35AP19-201ENST00000469425 329 ntBASIC3.66□□□□□ -1.82
CCL20P78556 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.66□□□□□ -1.82
CCL20P78556 RN7SL97P-201ENST00000486780 299 ntBASIC3.66□□□□□ -1.82
CCL20P78556 HMGB3P13-201ENST00000511263 607 ntBASIC3.66□□□□□ -1.82
CCL20P78556 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.66□□□□□ -1.82
CCL20P78556 AP002981.1-201ENST00000517692 975 ntBASIC3.66□□□□□ -1.82
CCL20P78556 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.66□□□□□ -1.82
CCL20P78556 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.66□□□□□ -1.82
CCL20P78556 AC006512.2-201ENST00000543250 486 ntBASIC3.66□□□□□ -1.82
CCL20P78556 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.66□□□□□ -1.82
CCL20P78556 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.66□□□□□ -1.82
CCL20P78556 TVP23CP2-201ENST00000571473 623 ntBASIC3.66□□□□□ -1.82
CCL20P78556 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC3.66□□□□□ -1.82
CCL20P78556 MIR4505-201ENST00000582238 73 ntBASIC3.66□□□□□ -1.82
CCL20P78556 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.66□□□□□ -1.82
CCL20P78556 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.66□□□□□ -1.82
CCL20P78556 AL121932.1-201ENST00000605542 214 ntBASIC3.66□□□□□ -1.82
CCL20P78556 AL512413.1-201ENST00000606489 382 ntBASIC3.66□□□□□ -1.82
CCL20P78556 AC005899.6-201ENST00000620729 297 ntBASIC3.66□□□□□ -1.82
CCL20P78556 AC011815.3-201ENST00000624194 473 ntBASIC3.66□□□□□ -1.82
CCL20P78556 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.66□□□□□ -1.82
CCL20P78556 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.66□□□□□ -1.82
CCL20P78556 RLIMP2-201ENST00000427891 1563 ntBASIC3.66□□□□□ -1.82
CCL20P78556 AC022306.1-201ENST00000560489 1562 ntBASIC3.66□□□□□ -1.82
CCL20P78556 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.66□□□□□ -1.82
CCL20P78556 ALB-209ENST00000503124 1741 ntTSL 5 BASIC3.66□□□□□ -1.82
CCL20P78556 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.66□□□□□ -1.82
CCL20P78556 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.66□□□□□ -1.82
CCL20P78556 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.66□□□□□ -1.82
CCL20P78556 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.66□□□□□ -1.82
CCL20P78556 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCL20P78556 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCL20P78556 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
CCL20P78556 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC3.65□□□□□ -1.82
CCL20P78556 AL031119.1-201ENST00000404707 1879 ntBASIC3.65□□□□□ -1.82
CCL20P78556 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCL20P78556 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCL20P78556 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CCL20P78556 RNU1-15P-201ENST00000353977 144 ntBASIC3.65□□□□□ -1.83
CCL20P78556 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.65□□□□□ -1.83
CCL20P78556 RNA5SP513-201ENST00000364648 118 ntBASIC3.65□□□□□ -1.83
CCL20P78556 BPHL-201ENST00000380368 797 ntTSL 5 BASIC3.65□□□□□ -1.83
CCL20P78556 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCL20P78556 MIR1275-201ENST00000408770 80 ntBASIC3.65□□□□□ -1.83
CCL20P78556 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.65□□□□□ -1.83
CCL20P78556 AC073335.1-201ENST00000427776 363 ntBASIC3.65□□□□□ -1.83
CCL20P78556 AC069154.1-201ENST00000432914 542 ntBASIC3.65□□□□□ -1.83
CCL20P78556 ELOCP18-201ENST00000434209 337 ntBASIC3.65□□□□□ -1.83
CCL20P78556 AC104306.1-201ENST00000449702 371 ntBASIC3.65□□□□□ -1.83
CCL20P78556 RPS26P41-201ENST00000450370 284 ntBASIC3.65□□□□□ -1.83
CCL20P78556 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.65□□□□□ -1.83
CCL20P78556 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms