Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PRKDCP78527 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PRKDCP78527 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PRKDCP78527 SYF2P2-201ENST00000417620 583 ntBASIC3.26□□□□□ -1.89
PRKDCP78527 AC140479.3-201ENST00000418944 1126 ntBASIC3.26□□□□□ -1.89
PRKDCP78527 BX276092.6-201ENST00000430476 250 ntBASIC3.26□□□□□ -1.89
PRKDCP78527 BX276092.8-201ENST00000455722 250 ntBASIC3.26□□□□□ -1.89
PRKDCP78527 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.26□□□□□ -1.89
PRKDCP78527 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.26□□□□□ -1.89
PRKDCP78527 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.26□□□□□ -1.89
PRKDCP78527 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.26□□□□□ -1.89
PRKDCP78527 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC3.26□□□□□ -1.89
PRKDCP78527 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
PRKDCP78527 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PRKDCP78527 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PRKDCP78527 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRKDCP78527 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PRKDCP78527 RNA5SP72-201ENST00000364442 117 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 RPL21P65-201ENST00000406094 466 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.25□□□□□ -1.89
PRKDCP78527 AC006499.5-201ENST00000505037 514 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 AC074250.1-201ENST00000511117 192 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 SNORA74C-1-201ENST00000580726 201 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 AC010680.3-201ENST00000604215 520 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC3.25□□□□□ -1.89
PRKDCP78527 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC3.25□□□□□ -1.89
PRKDCP78527 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRKDCP78527 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
PRKDCP78527 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC3.25□□□□□ -1.89
PRKDCP78527 MARK2P15-201ENST00000432204 2186 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PRKDCP78527 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PRKDCP78527 DNAJA1P3-201ENST00000399417 1194 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 AL603766.1-201ENST00000407763 664 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC3.25□□□□□ -1.89
PRKDCP78527 BX842559.2-201ENST00000451418 605 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 MTND4LP31-201ENST00000514859 294 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 RN7SKP248-201ENST00000516278 305 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 AC136777.2-201ENST00000522979 358 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRKDCP78527 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PRKDCP78527 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC3.25□□□□□ -1.89
PRKDCP78527 AL022323.4-201ENST00000623980 13120 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PRKDCP78527 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC3.25□□□□□ -1.89
PRKDCP78527 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC3.25□□□□□ -1.89
PRKDCP78527 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRKDCP78527 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC3.25□□□□□ -1.89
PRKDCP78527 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.25□□□□□ -1.89
PRKDCP78527 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.25□□□□□ -1.89
PRKDCP78527 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC3.25□□□□□ -1.89
PRKDCP78527 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.25□□□□□ -1.89
PRKDCP78527 AC005255.1-201ENST00000593748 216 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.25□□□□□ -1.89
PRKDCP78527 AC115621.1-201ENST00000604653 858 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.25□□□□□ -1.89
PRKDCP78527 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRKDCP78527 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC3.25□□□□□ -1.89
PRKDCP78527 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRKDCP78527 LRRC37A6P-202ENST00000448648 5444 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PRKDCP78527 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRKDCP78527 TTC41P-205ENST00000551270 3963 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC3.25□□□□□ -1.89
PRKDCP78527 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRKDCP78527 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.25□□□□□ -1.89
PRKDCP78527 AL358832.1-201ENST00000497800 389 ntBASIC3.25□□□□□ -1.89
PRKDCP78527 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC3.25□□□□□ -1.89
PRKDCP78527 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC3.24□□□□□ -1.89
PRKDCP78527 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
PRKDCP78527 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC3.24□□□□□ -1.89
PRKDCP78527 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC3.24□□□□□ -1.89
PRKDCP78527 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PRKDCP78527 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC3.24□□□□□ -1.89
PRKDCP78527 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC3.24□□□□□ -1.89
PRKDCP78527 AL031121.1-201ENST00000406553 254 ntBASIC3.24□□□□□ -1.89
PRKDCP78527 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.24□□□□□ -1.89
PRKDCP78527 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC3.24□□□□□ -1.89
PRKDCP78527 OR6C71P-201ENST00000432580 913 ntBASIC3.24□□□□□ -1.89
PRKDCP78527 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC3.24□□□□□ -1.89
PRKDCP78527 AP001804.2-201ENST00000533932 910 ntBASIC3.24□□□□□ -1.89
PRKDCP78527 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.24□□□□□ -1.89
PRKDCP78527 NBPF8-201ENST00000583271 5330 ntBASIC3.24□□□□□ -1.89
PRKDCP78527 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC3.24□□□□□ -1.89
PRKDCP78527 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PRKDCP78527 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC3.24□□□□□ -1.89
PRKDCP78527 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC3.24□□□□□ -1.89
PRKDCP78527 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PRKDCP78527 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
PRKDCP78527 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PRKDCP78527 MTND4LP17-201ENST00000414607 293 ntBASIC3.24□□□□□ -1.89
PRKDCP78527 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.24□□□□□ -1.89
PRKDCP78527 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PRKDCP78527 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PRKDCP78527 RN7SL293P-201ENST00000481765 281 ntBASIC3.24□□□□□ -1.89
PRKDCP78527 RN7SKP67-201ENST00000515905 235 ntBASIC3.24□□□□□ -1.89
PRKDCP78527 TVP23BP1-201ENST00000557500 617 ntBASIC3.24□□□□□ -1.89
PRKDCP78527 AC092354.2-201ENST00000607786 514 ntBASIC3.24□□□□□ -1.89
PRKDCP78527 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.24□□□□□ -1.89
PRKDCP78527 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms