Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 YWHAZP6-201ENST00000399764 738 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 RNA5SP198-201ENST00000410376 127 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 RNU6-920P-201ENST00000410926 92 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AL390774.1-201ENST00000411924 246 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.38□□□□□ -1.55
CLRN1P58418 AC006366.1-201ENST00000422002 759 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 AL022400.1-201ENST00000423946 935 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 OR5BE1P-201ENST00000425977 939 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.38□□□□□ -1.55
CLRN1P58418 AC124944.2-201ENST00000429866 1242 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.38□□□□□ -1.55
CLRN1P58418 USP9YP22-201ENST00000438971 294 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AL512593.1-201ENST00000444758 779 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.38□□□□□ -1.55
CLRN1P58418 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 ACA64.4-201ENST00000459070 127 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AC037198.2-201ENST00000478845 733 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 AC069304.1-201ENST00000491593 704 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 RN7SL568P-201ENST00000493069 298 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 AC112198.1-201ENST00000505369 1220 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 AC112484.3-201ENST00000505910 329 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 HSPE1P23-201ENST00000509838 286 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 HMGB3P13-201ENST00000511263 607 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 AC109445.1-201ENST00000512356 383 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 CR383658.1-201ENST00000514609 734 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 RNA5SP434-201ENST00000516647 121 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.38□□□□□ -1.55
CLRN1P58418 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 AP001317.1-201ENST00000531194 960 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.38□□□□□ -1.55
CLRN1P58418 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.38□□□□□ -1.55
CLRN1P58418 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.38□□□□□ -1.55
CLRN1P58418 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CLRN1P58418 AP000619.2-201ENST00000546014 969 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 BLZF2P-201ENST00000553776 1130 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AC004825.1-201ENST00000555068 586 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.38□□□□□ -1.55
CLRN1P58418 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 AC138207.8-204ENST00000579588 527 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.38□□□□□ -1.55
CLRN1P58418 AP002884.5-201ENST00000595053 1132 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.38□□□□□ -1.55
CLRN1P58418 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 AC073544.2-201ENST00000601155 540 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 SMIM12P1-201ENST00000603004 274 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AC100767.2-201ENST00000604840 693 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AC090525.3-201ENST00000605601 189 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AL139286.2-201ENST00000606838 396 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.38□□□□□ -1.55
CLRN1P58418 AC023158.2-201ENST00000614876 543 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AC008083.4-201ENST00000615076 444 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.38□□□□□ -1.55
CLRN1P58418 AP003072.4-201ENST00000624580 310 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.38□□□□□ -1.55
CLRN1P58418 AC073488.6-201ENST00000632293 754 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 AC090582.1-201ENST00000636321 199 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 OR5BE1P-202ENST00000641168 1176 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CLRN1P58418 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.38□□□□□ -1.55
CLRN1P58418 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLRN1P58418 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.38□□□□□ -1.55
CLRN1P58418 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.38□□□□□ -1.55
CLRN1P58418 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLRN1P58418 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLRN1P58418 THAP12P9-201ENST00000503971 2360 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.37□□□□□ -1.55
CLRN1P58418 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CLRN1P58418 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLRN1P58418 AL121950.1-201ENST00000624993 2077 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLRN1P58418 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLRN1P58418 SNORA11C-201ENST00000408532 129 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 RNU4-64P-201ENST00000410795 131 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 RN7SKP273-201ENST00000411392 314 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.37□□□□□ -1.55
CLRN1P58418 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.37□□□□□ -1.55
CLRN1P58418 OR6C64P-201ENST00000419708 825 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.37□□□□□ -1.55
CLRN1P58418 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.37□□□□□ -1.55
CLRN1P58418 MRPS36P1-201ENST00000421291 307 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms