Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CMC4P56277 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.67□□□□□ -1.82
CMC4P56277 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.67□□□□□ -1.82
CMC4P56277 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.67□□□□□ -1.82
CMC4P56277 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.67□□□□□ -1.82
CMC4P56277 OR11J2P-201ENST00000555298 907 ntBASIC3.67□□□□□ -1.82
CMC4P56277 AC122134.1-201ENST00000565664 1104 ntBASIC3.67□□□□□ -1.82
CMC4P56277 MTND2P13-201ENST00000577438 1039 ntBASIC3.67□□□□□ -1.82
CMC4P56277 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.67□□□□□ -1.82
CMC4P56277 FAM60CP-201ENST00000591086 664 ntBASIC3.67□□□□□ -1.82
CMC4P56277 MEMO1P5-201ENST00000604810 406 ntBASIC3.67□□□□□ -1.82
CMC4P56277 AC138473.1-201ENST00000605717 526 ntBASIC3.67□□□□□ -1.82
CMC4P56277 AC008833.1-201ENST00000611633 691 ntBASIC3.67□□□□□ -1.82
CMC4P56277 AC006840.1-201ENST00000623069 542 ntBASIC3.67□□□□□ -1.82
CMC4P56277 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CMC4P56277 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CMC4P56277 PHACTR2P1-201ENST00000605639 1414 ntBASIC3.67□□□□□ -1.82
CMC4P56277 MAPK10-338ENST00000641647 3362 ntBASIC3.67□□□□□ -1.82
CMC4P56277 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CMC4P56277 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC3.67□□□□□ -1.82
CMC4P56277 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CMC4P56277 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CMC4P56277 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC3.67□□□□□ -1.82
CMC4P56277 SMG1P6-201ENST00000532337 2930 ntBASIC3.67□□□□□ -1.82
CMC4P56277 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC3.67□□□□□ -1.82
CMC4P56277 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CMC4P56277 AC093775.1-201ENST00000624154 1868 ntBASIC3.67□□□□□ -1.82
CMC4P56277 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.66□□□□□ -1.82
CMC4P56277 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 AC068446.1-201ENST00000556425 1549 ntBASIC3.66□□□□□ -1.82
CMC4P56277 VPS35P1-201ENST00000563400 1518 ntBASIC3.66□□□□□ -1.82
CMC4P56277 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC3.66□□□□□ -1.82
CMC4P56277 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CMC4P56277 RN7SKP115-201ENST00000363177 317 ntBASIC3.66□□□□□ -1.82
CMC4P56277 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 RNA5SP105-201ENST00000391123 113 ntBASIC3.66□□□□□ -1.82
CMC4P56277 AC104297.1-201ENST00000393779 870 ntBASIC3.66□□□□□ -1.82
CMC4P56277 U3.32-201ENST00000408116 212 ntBASIC3.66□□□□□ -1.82
CMC4P56277 RN7SKP125-201ENST00000410481 302 ntBASIC3.66□□□□□ -1.82
CMC4P56277 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.66□□□□□ -1.82
CMC4P56277 SETP10-201ENST00000424368 814 ntBASIC3.66□□□□□ -1.82
CMC4P56277 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.66□□□□□ -1.82
CMC4P56277 AC007559.1-201ENST00000428736 355 ntBASIC3.66□□□□□ -1.82
CMC4P56277 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.66□□□□□ -1.82
CMC4P56277 BX323845.1-201ENST00000432417 179 ntBASIC3.66□□□□□ -1.82
CMC4P56277 PTMAP6-201ENST00000439110 327 ntBASIC3.66□□□□□ -1.82
CMC4P56277 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.66□□□□□ -1.82
CMC4P56277 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.66□□□□□ -1.82
CMC4P56277 OR1H1P-201ENST00000448731 937 ntBASIC3.66□□□□□ -1.82
CMC4P56277 FCF1P7-201ENST00000451185 558 ntBASIC3.66□□□□□ -1.82
CMC4P56277 AC234781.3-201ENST00000452540 973 ntBASIC3.66□□□□□ -1.82
CMC4P56277 AL691482.1-201ENST00000453255 87 ntBASIC3.66□□□□□ -1.82
CMC4P56277 SNRPCP3-201ENST00000474888 476 ntBASIC3.66□□□□□ -1.82
CMC4P56277 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.66□□□□□ -1.82
CMC4P56277 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.66□□□□□ -1.82
CMC4P56277 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.66□□□□□ -1.82
CMC4P56277 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.66□□□□□ -1.82
CMC4P56277 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC3.66□□□□□ -1.82
CMC4P56277 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.66□□□□□ -1.82
CMC4P56277 MIR3934-201ENST00000579806 107 ntBASIC3.66□□□□□ -1.82
CMC4P56277 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.66□□□□□ -1.82
CMC4P56277 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.66□□□□□ -1.82
CMC4P56277 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC3.66□□□□□ -1.82
CMC4P56277 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.66□□□□□ -1.82
CMC4P56277 AL121932.1-201ENST00000605542 214 ntBASIC3.66□□□□□ -1.82
CMC4P56277 AC010424.2-201ENST00000607594 443 ntBASIC3.66□□□□□ -1.82
CMC4P56277 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
CMC4P56277 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CMC4P56277 AL356317.1-201ENST00000396110 1436 ntBASIC3.66□□□□□ -1.82
CMC4P56277 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.66□□□□□ -1.82
CMC4P56277 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
CMC4P56277 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMC4P56277 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CMC4P56277 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CMC4P56277 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CMC4P56277 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CMC4P56277 AC008758.3-201ENST00000507003 1829 ntBASIC3.65□□□□□ -1.82
CMC4P56277 TTC39DP-201ENST00000416781 1688 ntBASIC3.65□□□□□ -1.82
CMC4P56277 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CMC4P56277 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.65□□□□□ -1.82
CMC4P56277 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CMC4P56277 AC027228.2-201ENST00000567141 2154 ntBASIC3.65□□□□□ -1.82
CMC4P56277 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CMC4P56277 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CMC4P56277 RN7SKP95-201ENST00000362860 303 ntBASIC3.65□□□□□ -1.83
CMC4P56277 RNA5SP123-201ENST00000363244 119 ntBASIC3.65□□□□□ -1.83
CMC4P56277 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
CMC4P56277 MT-RNR1-201ENST00000389680 954 ntBASIC3.65□□□□□ -1.83
CMC4P56277 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms