Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH12P55289 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH12P55289 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH12P55289 Z95152.1-201ENST00000453556 656 ntBASIC4.99□□□□□ -1.61
CDH12P55289 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH12P55289 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH12P55289 PRELID3BP5-201ENST00000508612 460 ntBASIC4.99□□□□□ -1.61
CDH12P55289 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH12P55289 HIGD1AP18-201ENST00000520730 278 ntBASIC4.99□□□□□ -1.61
CDH12P55289 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH12P55289 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.99□□□□□ -1.61
CDH12P55289 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH12P55289 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH12P55289 AL049830.4-201ENST00000555149 351 ntBASIC4.99□□□□□ -1.61
CDH12P55289 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH12P55289 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH12P55289 AC040958.1-201ENST00000561102 201 ntBASIC4.99□□□□□ -1.61
CDH12P55289 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH12P55289 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH12P55289 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH12P55289 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH12P55289 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH12P55289 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH12P55289 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH12P55289 AC234772.3-201ENST00000602277 528 ntBASIC4.99□□□□□ -1.61
CDH12P55289 Z99289.3-201ENST00000605586 594 ntBASIC4.99□□□□□ -1.61
CDH12P55289 AL365400.2-201ENST00000605604 902 ntBASIC4.99□□□□□ -1.61
CDH12P55289 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH12P55289 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH12P55289 AL365181.4-201ENST00000609800 547 ntBASIC4.99□□□□□ -1.61
CDH12P55289 AC079395.3-201ENST00000615161 484 ntBASIC4.99□□□□□ -1.61
CDH12P55289 AC138965.3-201ENST00000623875 498 ntBASIC4.99□□□□□ -1.61
CDH12P55289 AC132825.7-201ENST00000638744 335 ntBASIC4.99□□□□□ -1.61
CDH12P55289 AC073869.7-201ENST00000640874 297 ntBASIC4.99□□□□□ -1.61
CDH12P55289 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH12P55289 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH12P55289 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH12P55289 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH12P55289 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH12P55289 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH12P55289 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH12P55289 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH12P55289 AC091305.2-201ENST00000624049 1576 ntBASIC4.99□□□□□ -1.61
CDH12P55289 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH12P55289 AL132640.2-201ENST00000559968 1698 ntBASIC4.99□□□□□ -1.61
CDH12P55289 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH12P55289 LINC01963-201ENST00000562038 3148 ntBASIC4.99□□□□□ -1.61
CDH12P55289 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH12P55289 PROS2P-201ENST00000474651 1951 ntBASIC4.98□□□□□ -1.61
CDH12P55289 AC010266.2-201ENST00000564741 3255 ntBASIC4.98□□□□□ -1.61
CDH12P55289 CR788268.1-201ENST00000603931 1809 ntBASIC4.98□□□□□ -1.61
CDH12P55289 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CDH12P55289 OR9G4-201ENST00000302957 984 ntBASIC4.98□□□□□ -1.61
CDH12P55289 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH12P55289 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH12P55289 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH12P55289 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH12P55289 GAPDHP15-201ENST00000398586 975 ntBASIC4.98□□□□□ -1.61
CDH12P55289 RPL5P19-201ENST00000404228 893 ntBASIC4.98□□□□□ -1.61
CDH12P55289 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH12P55289 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH12P55289 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.98□□□□□ -1.61
CDH12P55289 COX5BP7-201ENST00000414780 274 ntBASIC4.98□□□□□ -1.61
CDH12P55289 EIF4A1P1-201ENST00000420241 934 ntBASIC4.98□□□□□ -1.61
CDH12P55289 AC093155.2-201ENST00000420734 937 ntBASIC4.98□□□□□ -1.61
CDH12P55289 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH12P55289 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH12P55289 OSTCP5-201ENST00000425293 453 ntBASIC4.98□□□□□ -1.61
CDH12P55289 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH12P55289 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDH12P55289 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH12P55289 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH12P55289 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH12P55289 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH12P55289 HMGN1P2-201ENST00000445197 310 ntBASIC4.98□□□□□ -1.61
CDH12P55289 AC099063.2-201ENST00000446360 662 ntBASIC4.98□□□□□ -1.61
CDH12P55289 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDH12P55289 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH12P55289 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH12P55289 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH12P55289 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH12P55289 AC112673.1-201ENST00000513168 575 ntBASIC4.98□□□□□ -1.61
CDH12P55289 CYCSP22-201ENST00000517555 339 ntBASIC4.98□□□□□ -1.61
CDH12P55289 MORF4L1P3-201ENST00000525966 950 ntBASIC4.98□□□□□ -1.61
CDH12P55289 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH12P55289 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH12P55289 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH12P55289 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH12P55289 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH12P55289 AC009852.2-201ENST00000567898 485 ntBASIC4.98□□□□□ -1.61
CDH12P55289 MIR4789-201ENST00000577469 82 ntBASIC4.98□□□□□ -1.61
CDH12P55289 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH12P55289 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH12P55289 AC009027.1-201ENST00000604510 479 ntBASIC4.98□□□□□ -1.61
CDH12P55289 AC073387.2-201ENST00000604797 784 ntBASIC4.98□□□□□ -1.61
CDH12P55289 AC009464.1-201ENST00000615731 469 ntBASIC4.98□□□□□ -1.61
CDH12P55289 AC006386.1-201ENST00000619436 415 ntBASIC4.98□□□□□ -1.61
CDH12P55289 AP000484.1-201ENST00000620067 1252 ntBASIC4.98□□□□□ -1.61
CDH12P55289 AP000676.4-201ENST00000624659 623 ntBASIC4.98□□□□□ -1.61
CDH12P55289 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms