Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC008562.1-201ENST00000521763 330 ntBASIC5.81□□□□□ -1.48
NEK3P51956 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.81□□□□□ -1.48
NEK3P51956 AC079064.1-201ENST00000528365 362 ntBASIC5.81□□□□□ -1.48
NEK3P51956 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.81□□□□□ -1.48
NEK3P51956 OR8A2P-201ENST00000528631 952 ntBASIC5.81□□□□□ -1.48
NEK3P51956 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.81□□□□□ -1.48
NEK3P51956 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.81□□□□□ -1.48
NEK3P51956 AC006518.2-201ENST00000542513 940 ntBASIC5.81□□□□□ -1.48
NEK3P51956 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.81□□□□□ -1.48
NEK3P51956 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.81□□□□□ -1.48
NEK3P51956 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.81□□□□□ -1.48
NEK3P51956 ZNF971P-201ENST00000562068 1249 ntBASIC5.81□□□□□ -1.48
NEK3P51956 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.81□□□□□ -1.48
NEK3P51956 AC090751.1-201ENST00000566966 267 ntBASIC5.81□□□□□ -1.48
NEK3P51956 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.81□□□□□ -1.48
NEK3P51956 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.81□□□□□ -1.48
NEK3P51956 AC026790.2-201ENST00000606282 430 ntBASIC5.81□□□□□ -1.48
NEK3P51956 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.81□□□□□ -1.48
NEK3P51956 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NEK3P51956 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
NEK3P51956 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.81□□□□□ -1.48
NEK3P51956 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.81□□□□□ -1.48
NEK3P51956 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NEK3P51956 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.81□□□□□ -1.48
NEK3P51956 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NEK3P51956 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NEK3P51956 AP001029.2-203ENST00000589795 4910 ntBASIC5.8□□□□□ -1.48
NEK3P51956 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEK3P51956 AC083899.1-201ENST00000454465 3819 ntBASIC5.8□□□□□ -1.48
NEK3P51956 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEK3P51956 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.8□□□□□ -1.48
NEK3P51956 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.8□□□□□ -1.48
NEK3P51956 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.8□□□□□ -1.48
NEK3P51956 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NEK3P51956 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NEK3P51956 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NEK3P51956 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEK3P51956 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NEK3P51956 MIR92A2-201ENST00000385299 75 ntBASIC5.8□□□□□ -1.48
NEK3P51956 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.8□□□□□ -1.48
NEK3P51956 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.8□□□□□ -1.48
NEK3P51956 BMS1P17-202ENST00000416720 316 ntBASIC5.8□□□□□ -1.48
NEK3P51956 RNGTTP1-201ENST00000420965 728 ntBASIC5.8□□□□□ -1.48
NEK3P51956 SFR1P2-201ENST00000421841 730 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AC246680.2-201ENST00000422106 389 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AL662874.1-201ENST00000426065 230 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.8□□□□□ -1.48
NEK3P51956 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.8□□□□□ -1.48
NEK3P51956 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.8□□□□□ -1.48
NEK3P51956 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.8□□□□□ -1.48
NEK3P51956 AL358794.1-201ENST00000445689 381 ntBASIC5.8□□□□□ -1.48
NEK3P51956 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.8□□□□□ -1.48
NEK3P51956 MRPL35P2-201ENST00000448009 511 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.8□□□□□ -1.48
NEK3P51956 RPS26P41-201ENST00000450370 284 ntBASIC5.8□□□□□ -1.48
NEK3P51956 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.8□□□□□ -1.48
NEK3P51956 RPL6P9-201ENST00000466502 859 ntBASIC5.8□□□□□ -1.48
NEK3P51956 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.8□□□□□ -1.48
NEK3P51956 RPL23AP37-201ENST00000479658 549 ntBASIC5.8□□□□□ -1.48
NEK3P51956 RPL32P33-201ENST00000487023 394 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AC009120.1-201ENST00000493458 473 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AL136038.1-201ENST00000497246 351 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AC074255.1-201ENST00000511259 501 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.8□□□□□ -1.48
NEK3P51956 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.8□□□□□ -1.48
NEK3P51956 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.8□□□□□ -1.48
NEK3P51956 SNORA43.3-201ENST00000517240 103 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.8□□□□□ -1.48
NEK3P51956 AC021451.1-201ENST00000523498 1129 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.8□□□□□ -1.48
NEK3P51956 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.8□□□□□ -1.48
NEK3P51956 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.8□□□□□ -1.48
NEK3P51956 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.8□□□□□ -1.48
NEK3P51956 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.8□□□□□ -1.48
NEK3P51956 MTND4LP24-201ENST00000572277 291 ntBASIC5.8□□□□□ -1.48
NEK3P51956 MIR4505-201ENST00000582238 73 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AC018809.2-201ENST00000602436 3823 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.8□□□□□ -1.48
NEK3P51956 FAM72A-208ENST00000607379 1139 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AL355816.1-201ENST00000607951 118 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AL121652.1-201ENST00000608851 448 ntBASIC5.8□□□□□ -1.48
NEK3P51956 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.8□□□□□ -1.48
NEK3P51956 AC092608.3-201ENST00000625017 386 ntBASIC5.8□□□□□ -1.48
NEK3P51956 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
NEK3P51956 AL049767.1-202ENST00000637826 242 ntBASIC5.8□□□□□ -1.48
NEK3P51956 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.8□□□□□ -1.48
NEK3P51956 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEK3P51956 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEK3P51956 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
NEK3P51956 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NEK3P51956 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEK3P51956 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEK3P51956 SAMMSON-213ENST00000641336 1521 ntBASIC5.79□□□□□ -1.48
NEK3P51956 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEK3P51956 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEK3P51956 AP004607.3-201ENST00000530354 3915 ntBASIC5.79□□□□□ -1.48
NEK3P51956 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NEK3P51956 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NEK3P51956 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEK3P51956 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms