Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 Y_RNA.231-201ENST00000364358 102 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 SNORA51.7-201ENST00000384171 134 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 RNU6-1297P-201ENST00000384415 104 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 AL139805.1-201ENST00000407837 289 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 SNORA2C-201ENST00000408564 137 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 RNA5SP498-201ENST00000411342 120 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 RPS21P8-201ENST00000413365 247 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 AC092634.6-201ENST00000418558 192 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF144AP50876 COX6CP17-201ENST00000421389 185 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF144AP50876 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 PRPS1P2-201ENST00000430496 937 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF144AP50876 SNRPEP7-201ENST00000438350 220 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF144AP50876 FO393419.1-201ENST00000443746 355 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF144AP50876 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF144AP50876 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 CECR9-201ENST00000453421 199 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF144AP50876 RN7SL58P-201ENST00000473445 294 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF144AP50876 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF144AP50876 NPM1P41-201ENST00000512920 831 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 Y_RNA.718-201ENST00000517110 102 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 IGKV2-29-201ENST00000521304 372 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF144AP50876 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.86□□□□□ -1.31
RNF144AP50876 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF144AP50876 NF1P12-201ENST00000549593 583 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF144AP50876 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF144AP50876 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF144AP50876 DPPA3P2-202ENST00000557188 1219 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF144AP50876 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF144AP50876 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF144AP50876 BX323046.1-201ENST00000610145 535 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 AL353898.2-201ENST00000623000 255 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 AC009161.2-201ENST00000624626 138 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.86□□□□□ -1.31
RNF144AP50876 AL590065.1-201ENST00000603371 4774 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 CCT8P1-201ENST00000413611 1657 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 AL589993.1-201ENST00000407450 2524 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 AC087045.3-201ENST00000623046 2468 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF144AP50876 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.86□□□□□ -1.31
RNF144AP50876 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.85□□□□□ -1.31
RNF144AP50876 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF144AP50876 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 AC104581.5-201ENST00000624171 7141 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.85□□□□□ -1.31
RNF144AP50876 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF144AP50876 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.85□□□□□ -1.31
RNF144AP50876 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 DDX50P1-201ENST00000438163 2400 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
RNF144AP50876 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RNF144AP50876 RPL7P26-201ENST00000333817 754 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RNF144AP50876 Y_RNA.193-201ENST00000363979 102 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 RN7SKP6-201ENST00000364795 319 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 RNA5SP79-201ENST00000365193 109 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 RNU6-532P-201ENST00000384318 107 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 RPS20P2-201ENST00000402520 389 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 GAPDHP42-201ENST00000406848 981 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 AL355862.1-201ENST00000412705 353 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 MED15P9-201ENST00000424716 533 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.85□□□□□ -1.31
RNF144AP50876 MTCYBP9-201ENST00000431021 303 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 AC006335.2-201ENST00000437993 330 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF144AP50876 AL731563.1-201ENST00000442202 214 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 AL451074.4-201ENST00000447545 470 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 AL136380.1-201ENST00000447970 162 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF144AP50876 RNU6-1208P-201ENST00000459588 107 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.85□□□□□ -1.31
RNF144AP50876 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.85□□□□□ -1.31
RNF144AP50876 AC108693.1-201ENST00000496068 432 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC6.85□□□□□ -1.31
RNF144AP50876 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 AC006070.1-201ENST00000508151 193 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.85□□□□□ -1.31
RNF144AP50876 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.85□□□□□ -1.31
RNF144AP50876 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.85□□□□□ -1.31
RNF144AP50876 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms