Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RN7SKP149-201ENST00000363008 344 ntBASIC4.81□□□□□ -1.64
RORAP35398 RN7SKP113-201ENST00000363891 295 ntBASIC4.81□□□□□ -1.64
RORAP35398 SNORA66-201ENST00000384792 133 ntBASIC4.81□□□□□ -1.64
RORAP35398 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RORAP35398 AL035419.1-201ENST00000397037 564 ntBASIC4.81□□□□□ -1.64
RORAP35398 AP002530.1-201ENST00000405705 684 ntBASIC4.81□□□□□ -1.64
RORAP35398 AL360081.1-201ENST00000428299 555 ntBASIC4.81□□□□□ -1.64
RORAP35398 FABP7P2-201ENST00000429946 379 ntBASIC4.81□□□□□ -1.64
RORAP35398 NFYAP1-201ENST00000431953 972 ntBASIC4.81□□□□□ -1.64
RORAP35398 BX323845.1-201ENST00000432417 179 ntBASIC4.81□□□□□ -1.64
RORAP35398 AC092447.2-201ENST00000435487 669 ntBASIC4.81□□□□□ -1.64
RORAP35398 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.81□□□□□ -1.64
RORAP35398 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.81□□□□□ -1.64
RORAP35398 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.81□□□□□ -1.64
RORAP35398 AL354714.3-201ENST00000447284 493 ntBASIC4.81□□□□□ -1.64
RORAP35398 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.81□□□□□ -1.64
RORAP35398 OR52E3P-201ENST00000452083 936 ntBASIC4.81□□□□□ -1.64
RORAP35398 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.81□□□□□ -1.64
RORAP35398 AC002456.2-201ENST00000509356 380 ntBASIC4.81□□□□□ -1.64
RORAP35398 AC016559.2-201ENST00000510759 359 ntBASIC4.81□□□□□ -1.64
RORAP35398 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.81□□□□□ -1.64
RORAP35398 AC027369.5-201ENST00000533838 755 ntBASIC4.81□□□□□ -1.64
RORAP35398 NMNAT1P1-201ENST00000554095 876 ntBASIC4.81□□□□□ -1.64
RORAP35398 SULT1C2P2-201ENST00000562517 294 ntBASIC4.81□□□□□ -1.64
RORAP35398 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.81□□□□□ -1.64
RORAP35398 MTCYBP13-201ENST00000578634 1093 ntBASIC4.81□□□□□ -1.64
RORAP35398 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.81□□□□□ -1.64
RORAP35398 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.81□□□□□ -1.64
RORAP35398 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.81□□□□□ -1.64
RORAP35398 AC026367.3-201ENST00000619032 590 ntBASIC4.81□□□□□ -1.64
RORAP35398 AC091932.2-201ENST00000623014 291 ntBASIC4.81□□□□□ -1.64
RORAP35398 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.81□□□□□ -1.64
RORAP35398 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.81□□□□□ -1.64
RORAP35398 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RORAP35398 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RORAP35398 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RORAP35398 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.81□□□□□ -1.64
RORAP35398 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RORAP35398 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RORAP35398 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
RORAP35398 AC000374.1-201ENST00000434698 1745 ntBASIC4.8□□□□□ -1.64
RORAP35398 SCN1A-220ENST00000641603 12506 ntBASIC4.8□□□□□ -1.64
RORAP35398 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RORAP35398 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.8□□□□□ -1.64
RORAP35398 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
RORAP35398 AC022417.1-201ENST00000624768 1303 ntBASIC4.8□□□□□ -1.64
RORAP35398 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RORAP35398 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.8□□□□□ -1.64
RORAP35398 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RORAP35398 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.8□□□□□ -1.64
RORAP35398 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.8□□□□□ -1.64
RORAP35398 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.8□□□□□ -1.64
RORAP35398 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.8□□□□□ -1.64
RORAP35398 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.8□□□□□ -1.64
RORAP35398 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.8□□□□□ -1.64
RORAP35398 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.8□□□□□ -1.64
RORAP35398 OR7E125P-201ENST00000443450 846 ntBASIC4.8□□□□□ -1.64
RORAP35398 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.8□□□□□ -1.64
RORAP35398 OR52Y1P-201ENST00000452418 828 ntBASIC4.8□□□□□ -1.64
RORAP35398 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.8□□□□□ -1.64
RORAP35398 RPL5P16-201ENST00000471467 790 ntBASIC4.8□□□□□ -1.64
RORAP35398 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.8□□□□□ -1.64
RORAP35398 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.8□□□□□ -1.64
RORAP35398 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.8□□□□□ -1.64
RORAP35398 BTF3P13-201ENST00000513224 490 ntBASIC4.8□□□□□ -1.64
RORAP35398 HMGB1P19-201ENST00000517578 577 ntBASIC4.8□□□□□ -1.64
RORAP35398 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.8□□□□□ -1.64
RORAP35398 AC022616.2-201ENST00000523185 300 ntBASIC4.8□□□□□ -1.64
RORAP35398 AC021006.3-201ENST00000530771 192 ntBASIC4.8□□□□□ -1.64
RORAP35398 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
RORAP35398 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.8□□□□□ -1.64
RORAP35398 AC009117.1-201ENST00000563948 554 ntBASIC4.8□□□□□ -1.64
RORAP35398 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.8□□□□□ -1.64
RORAP35398 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.8□□□□□ -1.64
RORAP35398 BNIP3P35-201ENST00000604530 490 ntBASIC4.8□□□□□ -1.64
RORAP35398 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RORAP35398 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RORAP35398 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RORAP35398 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RORAP35398 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RORAP35398 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.8□□□□□ -1.64
RORAP35398 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.8□□□□□ -1.64
RORAP35398 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.8□□□□□ -1.64
RORAP35398 IRF5P1-201ENST00000504852 2164 ntBASIC4.8□□□□□ -1.64
RORAP35398 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RORAP35398 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RORAP35398 THAP12P8-201ENST00000447914 2115 ntBASIC4.79□□□□□ -1.64
RORAP35398 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RORAP35398 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RORAP35398 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.79□□□□□ -1.64
RORAP35398 RNA5SP443-201ENST00000363083 132 ntBASIC4.79□□□□□ -1.64
RORAP35398 RN7SKP224-201ENST00000364140 325 ntBASIC4.79□□□□□ -1.64
RORAP35398 Z97832.1-201ENST00000402490 328 ntBASIC4.79□□□□□ -1.64
RORAP35398 AL359643.1-201ENST00000404109 423 ntBASIC4.79□□□□□ -1.64
RORAP35398 AL390316.1-201ENST00000406279 553 ntBASIC4.79□□□□□ -1.64
RORAP35398 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.79□□□□□ -1.64
RORAP35398 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.79□□□□□ -1.64
RORAP35398 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.79□□□□□ -1.64
RORAP35398 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.79□□□□□ -1.64
RORAP35398 IGHV5-78-201ENST00000450948 295 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms