Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.77□□□□□ -1.49
CIITAP33076 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CIITAP33076 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.77□□□□□ -1.49
CIITAP33076 LYPLA1P1-201ENST00000434514 622 ntBASIC5.77□□□□□ -1.49
CIITAP33076 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.77□□□□□ -1.49
CIITAP33076 EIF2S2P5-201ENST00000457635 968 ntBASIC5.77□□□□□ -1.49
CIITAP33076 RN7SL441P-201ENST00000492388 296 ntBASIC5.77□□□□□ -1.49
CIITAP33076 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CIITAP33076 AC147055.3-201ENST00000510547 851 ntBASIC5.77□□□□□ -1.49
CIITAP33076 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.77□□□□□ -1.49
CIITAP33076 RNU6-1102P-201ENST00000516149 96 ntBASIC5.77□□□□□ -1.49
CIITAP33076 RN7SKP147-201ENST00000517154 244 ntBASIC5.77□□□□□ -1.49
CIITAP33076 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.77□□□□□ -1.49
CIITAP33076 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.77□□□□□ -1.49
CIITAP33076 AC138701.1-201ENST00000524329 714 ntBASIC5.77□□□□□ -1.49
CIITAP33076 AP001372.4-201ENST00000524889 472 ntBASIC5.77□□□□□ -1.49
CIITAP33076 AC113192.3-201ENST00000529152 742 ntBASIC5.77□□□□□ -1.49
CIITAP33076 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.77□□□□□ -1.49
CIITAP33076 OR7E128P-201ENST00000532736 1024 ntBASIC5.77□□□□□ -1.49
CIITAP33076 AL512310.9-201ENST00000553311 948 ntBASIC5.77□□□□□ -1.49
CIITAP33076 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.77□□□□□ -1.49
CIITAP33076 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.77□□□□□ -1.49
CIITAP33076 AC019322.1-201ENST00000571869 389 ntBASIC5.77□□□□□ -1.49
CIITAP33076 MIR4691-201ENST00000583764 85 ntBASIC5.77□□□□□ -1.49
CIITAP33076 AC096947.1-201ENST00000603233 470 ntBASIC5.77□□□□□ -1.49
CIITAP33076 AC105254.2-201ENST00000603636 436 ntBASIC5.77□□□□□ -1.49
CIITAP33076 AC018754.1-201ENST00000607486 925 ntBASIC5.77□□□□□ -1.49
CIITAP33076 CR589904.2-201ENST00000612533 440 ntBASIC5.77□□□□□ -1.49
CIITAP33076 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CIITAP33076 AC091932.2-201ENST00000623014 291 ntBASIC5.77□□□□□ -1.49
CIITAP33076 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.77□□□□□ -1.49
CIITAP33076 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CIITAP33076 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CIITAP33076 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CIITAP33076 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.77□□□□□ -1.49
CIITAP33076 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.77□□□□□ -1.49
CIITAP33076 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
CIITAP33076 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CIITAP33076 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.77□□□□□ -1.49
CIITAP33076 AC110792.3-201ENST00000595906 1614 ntBASIC5.77□□□□□ -1.49
CIITAP33076 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.77□□□□□ -1.49
CIITAP33076 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CIITAP33076 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CIITAP33076 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CIITAP33076 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CIITAP33076 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CIITAP33076 RLIMP2-201ENST00000427891 1563 ntBASIC5.76□□□□□ -1.49
CIITAP33076 CASC19-281ENST00000642118 1554 ntBASIC5.76□□□□□ -1.49
CIITAP33076 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CIITAP33076 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CIITAP33076 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.76□□□□□ -1.49
CIITAP33076 AC097461.1-201ENST00000568928 2821 ntBASIC5.76□□□□□ -1.49
CIITAP33076 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.76□□□□□ -1.49
CIITAP33076 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CIITAP33076 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CIITAP33076 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
CIITAP33076 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.76□□□□□ -1.49
CIITAP33076 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CIITAP33076 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CIITAP33076 SNORD51.1-201ENST00000365405 77 ntBASIC5.76□□□□□ -1.49
CIITAP33076 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.76□□□□□ -1.49
CIITAP33076 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CIITAP33076 SNORA5.1-201ENST00000384275 131 ntBASIC5.76□□□□□ -1.49
CIITAP33076 CHMP1B2P-201ENST00000399581 597 ntBASIC5.76□□□□□ -1.49
CIITAP33076 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.76□□□□□ -1.49
CIITAP33076 AL109941.1-201ENST00000401925 229 ntBASIC5.76□□□□□ -1.49
CIITAP33076 AL353692.2-201ENST00000407054 335 ntBASIC5.76□□□□□ -1.49
CIITAP33076 SNORA79B-201ENST00000410557 148 ntBASIC5.76□□□□□ -1.49
CIITAP33076 GJA6P-201ENST00000415117 1042 ntBASIC5.76□□□□□ -1.49
CIITAP33076 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.76□□□□□ -1.49
CIITAP33076 COX6CP13-201ENST00000428703 226 ntBASIC5.76□□□□□ -1.49
CIITAP33076 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.76□□□□□ -1.49
CIITAP33076 FTLP19-201ENST00000433300 394 ntBASIC5.76□□□□□ -1.49
CIITAP33076 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CIITAP33076 XKRY2-201ENST00000442362 1093 ntBASIC5.76□□□□□ -1.49
CIITAP33076 AL354714.3-201ENST00000447284 493 ntBASIC5.76□□□□□ -1.49
CIITAP33076 COX6B1P5-201ENST00000509843 249 ntBASIC5.76□□□□□ -1.49
CIITAP33076 TPT1P8-201ENST00000510120 555 ntBASIC5.76□□□□□ -1.49
CIITAP33076 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.76□□□□□ -1.49
CIITAP33076 RNA5SP43-201ENST00000516559 110 ntBASIC5.76□□□□□ -1.49
CIITAP33076 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.76□□□□□ -1.49
CIITAP33076 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.76□□□□□ -1.49
CIITAP33076 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.76□□□□□ -1.49
CIITAP33076 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.76□□□□□ -1.49
CIITAP33076 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.76□□□□□ -1.49
CIITAP33076 AC027216.1-201ENST00000577726 685 ntBASIC5.76□□□□□ -1.49
CIITAP33076 AC133644.2-201ENST00000608142 540 ntBASIC5.76□□□□□ -1.49
CIITAP33076 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.76□□□□□ -1.49
CIITAP33076 AF129408.1-201ENST00000608767 431 ntBASIC5.76□□□□□ -1.49
CIITAP33076 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.76□□□□□ -1.49
CIITAP33076 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CIITAP33076 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CIITAP33076 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CIITAP33076 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.76□□□□□ -1.49
CIITAP33076 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.76□□□□□ -1.49
CIITAP33076 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CIITAP33076 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CIITAP33076 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.76□□□□□ -1.49
CIITAP33076 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CIITAP33076 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms