Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
COL5A1P20908 RNU6-761P-201ENST00000384148 107 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 QRSL1P2-201ENST00000418582 964 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 AC140479.3-201ENST00000418944 1126 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 VN1R37P-201ENST00000419096 748 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 RPEP3-201ENST00000425462 676 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 AL732292.1-201ENST00000426692 226 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.6□□□□□ -1.67
COL5A1P20908 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.6□□□□□ -1.67
COL5A1P20908 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.6□□□□□ -1.67
COL5A1P20908 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.6□□□□□ -1.67
COL5A1P20908 AC068831.4-201ENST00000556118 109 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.6□□□□□ -1.67
COL5A1P20908 AC007224.1-201ENST00000564410 144 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 AC069061.3-201ENST00000582254 823 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.6□□□□□ -1.67
COL5A1P20908 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC4.6□□□□□ -1.67
COL5A1P20908 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.6□□□□□ -1.67
COL5A1P20908 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
COL5A1P20908 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL5A1P20908 AC120338.1-201ENST00000625074 1541 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.6□□□□□ -1.67
COL5A1P20908 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
COL5A1P20908 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL5A1P20908 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL5A1P20908 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL5A1P20908 AC073136.1-201ENST00000449426 2884 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
COL5A1P20908 AC104333.2-201ENST00000422630 192 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 MRPL35P2-201ENST00000448009 511 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 RN7SL517P-201ENST00000462240 305 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 MTCO1P35-201ENST00000515270 228 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 RNU6-709P-201ENST00000517257 104 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.6□□□□□ -1.67
COL5A1P20908 FRG1EP-201ENST00000634469 770 ntBASIC4.6□□□□□ -1.67
COL5A1P20908 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL5A1P20908 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.6□□□□□ -1.67
COL5A1P20908 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC4.6□□□□□ -1.67
COL5A1P20908 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
COL5A1P20908 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.6□□□□□ -1.67
COL5A1P20908 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL5A1P20908 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.6□□□□□ -1.67
COL5A1P20908 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
COL5A1P20908 CASC19-255ENST00000641733 1385 ntBASIC4.59□□□□□ -1.67
COL5A1P20908 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL5A1P20908 SALL4P2-201ENST00000423288 2910 ntBASIC4.59□□□□□ -1.67
COL5A1P20908 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC4.59□□□□□ -1.67
COL5A1P20908 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL5A1P20908 AC108751.5-201ENST00000492880 1336 ntBASIC4.59□□□□□ -1.67
COL5A1P20908 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.59□□□□□ -1.67
COL5A1P20908 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL5A1P20908 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL5A1P20908 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL5A1P20908 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL5A1P20908 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL5A1P20908 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
COL5A1P20908 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COL5A1P20908 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL5A1P20908 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.59□□□□□ -1.67
COL5A1P20908 AC010618.1-201ENST00000469924 477 ntBASIC4.59□□□□□ -1.67
COL5A1P20908 NIFKP7-201ENST00000503365 834 ntBASIC4.59□□□□□ -1.67
COL5A1P20908 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.59□□□□□ -1.67
COL5A1P20908 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.59□□□□□ -1.67
COL5A1P20908 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.59□□□□□ -1.67
COL5A1P20908 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.59□□□□□ -1.67
COL5A1P20908 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.59□□□□□ -1.67
COL5A1P20908 AC012409.3-201ENST00000611343 981 ntBASIC4.59□□□□□ -1.67
COL5A1P20908 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.59□□□□□ -1.67
COL5A1P20908 AC034229.5-201ENST00000624258 185 ntBASIC4.59□□□□□ -1.67
COL5A1P20908 U3.53-201ENST00000628922 216 ntBASIC4.59□□□□□ -1.67
COL5A1P20908 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.59□□□□□ -1.67
COL5A1P20908 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC4.59□□□□□ -1.67
COL5A1P20908 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL5A1P20908 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL5A1P20908 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.59□□□□□ -1.67
COL5A1P20908 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.59□□□□□ -1.67
COL5A1P20908 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL5A1P20908 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL5A1P20908 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL5A1P20908 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL5A1P20908 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL5A1P20908 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL5A1P20908 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.58□□□□□ -1.68
COL5A1P20908 RNA5SP387-201ENST00000364226 106 ntBASIC4.58□□□□□ -1.68
COL5A1P20908 OR6C69P-201ENST00000394268 893 ntBASIC4.58□□□□□ -1.68
COL5A1P20908 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.58□□□□□ -1.68
COL5A1P20908 PCNPP4-201ENST00000414817 517 ntBASIC4.58□□□□□ -1.68
COL5A1P20908 RPS17P8-201ENST00000434525 335 ntBASIC4.58□□□□□ -1.68
COL5A1P20908 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.58□□□□□ -1.68
COL5A1P20908 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.58□□□□□ -1.68
COL5A1P20908 RPL23AP24-201ENST00000458203 385 ntBASIC4.58□□□□□ -1.68
COL5A1P20908 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.58□□□□□ -1.68
COL5A1P20908 AP002812.1-201ENST00000495378 474 ntBASIC4.58□□□□□ -1.68
COL5A1P20908 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.58□□□□□ -1.68
COL5A1P20908 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.58□□□□□ -1.68
COL5A1P20908 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.58□□□□□ -1.68
COL5A1P20908 AC008833.1-201ENST00000611633 691 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms