Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC015914.2-201ENST00000618167 288 ntBASIC5.72□□□□□ -1.49
TOP1P11387 CUL4AP1-201ENST00000514750 1863 ntBASIC5.72□□□□□ -1.49
TOP1P11387 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOP1P11387 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TOP1P11387 AL606537.1-201ENST00000607258 2011 ntBASIC5.72□□□□□ -1.49
TOP1P11387 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOP1P11387 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.72□□□□□ -1.49
TOP1P11387 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.72□□□□□ -1.49
TOP1P11387 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOP1P11387 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TOP1P11387 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TOP1P11387 AC019072.1-201ENST00000604535 1551 ntBASIC5.72□□□□□ -1.49
TOP1P11387 AC008758.3-201ENST00000507003 1829 ntBASIC5.71□□□□□ -1.49
TOP1P11387 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TOP1P11387 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
TOP1P11387 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.71□□□□□ -1.49
TOP1P11387 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.71□□□□□ -1.49
TOP1P11387 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TOP1P11387 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TOP1P11387 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TOP1P11387 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TOP1P11387 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TOP1P11387 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TOP1P11387 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP1P11387 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP1P11387 AC013429.2-201ENST00000418798 781 ntBASIC5.71□□□□□ -1.5
TOP1P11387 AC004074.1-201ENST00000421810 1063 ntBASIC5.71□□□□□ -1.5
TOP1P11387 AC106901.1-201ENST00000425086 698 ntBASIC5.71□□□□□ -1.5
TOP1P11387 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP1P11387 RN7SL517P-201ENST00000462240 305 ntBASIC5.71□□□□□ -1.5
TOP1P11387 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.71□□□□□ -1.5
TOP1P11387 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TOP1P11387 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.71□□□□□ -1.5
TOP1P11387 HMGB3P16-201ENST00000508037 287 ntBASIC5.71□□□□□ -1.5
TOP1P11387 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.71□□□□□ -1.5
TOP1P11387 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.71□□□□□ -1.5
TOP1P11387 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP1P11387 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.71□□□□□ -1.5
TOP1P11387 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.71□□□□□ -1.5
TOP1P11387 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.71□□□□□ -1.5
TOP1P11387 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.71□□□□□ -1.5
TOP1P11387 AGGF1P9-201ENST00000561884 913 ntBASIC5.71□□□□□ -1.5
TOP1P11387 MIR4700-201ENST00000578311 74 ntBASIC5.71□□□□□ -1.5
TOP1P11387 AP000919.1-201ENST00000582850 985 ntBASIC5.71□□□□□ -1.5
TOP1P11387 RN7SL435P-201ENST00000584418 282 ntBASIC5.71□□□□□ -1.5
TOP1P11387 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP1P11387 AL391358.1-201ENST00000605342 190 ntBASIC5.71□□□□□ -1.5
TOP1P11387 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP1P11387 BNIP3P41-202ENST00000616656 861 ntBASIC5.71□□□□□ -1.5
TOP1P11387 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TOP1P11387 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TOP1P11387 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
TOP1P11387 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.71□□□□□ -1.5
TOP1P11387 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TOP1P11387 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP1P11387 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP1P11387 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.71□□□□□ -1.5
TOP1P11387 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TOP1P11387 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
TOP1P11387 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TOP1P11387 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.7□□□□□ -1.5
TOP1P11387 AC104260.2-201ENST00000623551 3497 ntBASIC5.7□□□□□ -1.5
TOP1P11387 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TOP1P11387 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.7□□□□□ -1.5
TOP1P11387 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TOP1P11387 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TOP1P11387 RN7SKP100-201ENST00000411258 284 ntBASIC5.7□□□□□ -1.5
TOP1P11387 AC114755.2-201ENST00000413520 361 ntBASIC5.7□□□□□ -1.5
TOP1P11387 HSPE1P16-201ENST00000426640 348 ntBASIC5.7□□□□□ -1.5
TOP1P11387 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.7□□□□□ -1.5
TOP1P11387 RPSAP41-201ENST00000439695 860 ntBASIC5.7□□□□□ -1.5
TOP1P11387 OR1H1P-201ENST00000448731 937 ntBASIC5.7□□□□□ -1.5
TOP1P11387 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.7□□□□□ -1.5
TOP1P11387 AC093166.2-201ENST00000455969 1017 ntBASIC5.7□□□□□ -1.5
TOP1P11387 TPT1P1-201ENST00000458495 518 ntBASIC5.7□□□□□ -1.5
TOP1P11387 AL671862.1-201ENST00000515851 349 ntBASIC5.7□□□□□ -1.5
TOP1P11387 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.7□□□□□ -1.5
TOP1P11387 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.7□□□□□ -1.5
TOP1P11387 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.7□□□□□ -1.5
TOP1P11387 DUX4L52-201ENST00000549363 777 ntBASIC5.7□□□□□ -1.5
TOP1P11387 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.7□□□□□ -1.5
TOP1P11387 AL512782.1-201ENST00000603093 364 ntBASIC5.7□□□□□ -1.5
TOP1P11387 AC096586.2-201ENST00000610260 441 ntBASIC5.7□□□□□ -1.5
TOP1P11387 AL022401.1-201ENST00000619498 108 ntBASIC5.7□□□□□ -1.5
TOP1P11387 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.7□□□□□ -1.5
TOP1P11387 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.7□□□□□ -1.5
TOP1P11387 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TOP1P11387 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TOP1P11387 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.7□□□□□ -1.5
TOP1P11387 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOP1P11387 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TOP1P11387 SAMMSON-213ENST00000641336 1521 ntBASIC5.69□□□□□ -1.5
TOP1P11387 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
TOP1P11387 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TOP1P11387 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOP1P11387 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.69□□□□□ -1.5
TOP1P11387 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.69□□□□□ -1.5
TOP1P11387 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.69□□□□□ -1.5
TOP1P11387 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TOP1P11387 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms