Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC6P09630 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC6P09630 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC6P09630 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC6P09630 AC019322.1-201ENST00000571869 389 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 DNAJC19P3-201ENST00000594491 331 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 AC135803.1-201ENST00000608748 565 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 AL391834.1-201ENST00000609609 560 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 AL391834.2-201ENST00000609982 546 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 AC021106.3-201ENST00000623925 531 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC6P09630 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXC6P09630 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC6P09630 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HOXC6P09630 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC6P09630 TTC41P-205ENST00000551270 3963 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 OR4G1P-202ENST00000641173 1788 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC6P09630 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HOXC6P09630 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC6P09630 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC6P09630 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC6P09630 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC6P09630 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC6P09630 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC6P09630 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC6P09630 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC6P09630 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC6P09630 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC6P09630 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC6P09630 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HOXC6P09630 AL078595.2-201ENST00000605309 1780 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC6P09630 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HOXC6P09630 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC6P09630 RPL32P3-201ENST00000359025 275 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 GPS2P1-201ENST00000411761 986 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 COX6CP13-201ENST00000428703 226 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 RPL19P16-201ENST00000433839 588 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 AC074367.1-201ENST00000438685 1125 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 AC234781.3-201ENST00000452540 973 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 AC009963.2-201ENST00000453431 138 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 STRADBP1-201ENST00000478954 1281 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC6P09630 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC6P09630 AC110760.3-202ENST00000515177 371 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 RN7SKP92-201ENST00000517266 244 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 AC092709.1-201ENST00000521355 1045 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 SOX5P1-201ENST00000524155 1127 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC6P09630 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC6P09630 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC6P09630 HMGN2P47-201ENST00000559378 272 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 MTND1P8-201ENST00000571424 950 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC6P09630 AC084824.5-201ENST00000612009 413 ntBASIC5.66□□□□□ -1.5
HOXC6P09630 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC6P09630 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC6P09630 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC6P09630 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC6P09630 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HOXC6P09630 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC6P09630 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 CASC19-260ENST00000641828 2001 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC6P09630 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC6P09630 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC6P09630 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC6P09630 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC6P09630 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC6P09630 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC6P09630 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HOXC6P09630 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
HOXC6P09630 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC6P09630 OR4K15-201ENST00000305051 1216 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 RNA5SP223-201ENST00000365174 120 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 SNORA70F-201ENST00000384142 135 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 RSL24D1P1-201ENST00000404972 493 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 UBE2V1P15-201ENST00000407776 448 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 RNU6-564P-201ENST00000410983 104 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 MTND4P11-201ENST00000417020 1058 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC6P09630 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC6P09630 EIF2S2P5-201ENST00000457635 968 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 RPL23AP56-201ENST00000460778 453 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 IGBP1P5-201ENST00000507524 1000 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC6P09630 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC6P09630 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC6P09630 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC6P09630 RN7SL290P-201ENST00000578661 300 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC6P09630 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
HOXC6P09630 AC006927.4-201ENST00000639187 543 ntBASIC5.65□□□□□ -1.5
HOXC6P09630 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HOXC6P09630 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC6P09630 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms