Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AP001784.1-201ENST00000624107 428 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AP002967.1-201ENST00000624203 539 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC139792.2-201ENST00000624218 587 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 OFD1P17-201ENST00000437639 3018 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC073365.1-203ENST00000641055 1992 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DOAP06340 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DOAP06340 AC103591.2-201ENST00000265259 766 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 RN7SKP103-201ENST00000363848 320 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 MIR585-201ENST00000384887 94 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 MTCO1P51-201ENST00000427672 1060 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DOAP06340 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 MTND2P5-201ENST00000432656 1006 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 SETD6P1-201ENST00000444575 317 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 COX6B1P2-201ENST00000489624 230 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DOAP06340 IGBP1P4-201ENST00000503202 879 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 AGGF1P9-201ENST00000561884 913 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 AC018558.5-201ENST00000565840 952 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 AC005242.1-201ENST00000585658 438 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 AL160237.3-201ENST00000604114 1013 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 AC080013.6-201ENST00000606185 215 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 AL645927.2-201ENST00000618350 349 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 AC021422.1-201ENST00000621212 473 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 AP003485.2-201ENST00000623636 610 ntBASIC6.17□□□□□ -1.42
HLA-DOAP06340 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DOAP06340 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DOAP06340 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HLA-DOAP06340 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DOAP06340 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DOAP06340 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DOAP06340 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 NXF4-202ENST00000416098 1465 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DOAP06340 CUL4AP1-201ENST00000514750 1863 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 AC034229.2-201ENST00000566945 2508 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 RNA5SP455-201ENST00000365190 119 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 AL078599.1-201ENST00000402075 293 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 FO393414.1-201ENST00000428697 1184 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 AC090018.1-201ENST00000434369 367 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 PA2G4P6-201ENST00000438325 1197 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 ARL5AP3-201ENST00000439327 386 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 snoU13.20-201ENST00000459180 104 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 AC115223.1-201ENST00000466377 870 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 RN7SL189P-201ENST00000468631 289 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 AC020898.1-201ENST00000474167 787 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 AP000797.2-201ENST00000475768 606 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 PPM1AP1-201ENST00000502740 1135 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 EIF4A2P5-201ENST00000529914 499 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 PCNPP1-201ENST00000552501 511 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 AC011330.2-201ENST00000621680 635 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 AC091905.4-201ENST00000623432 202 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DOAP06340 AL121839.2-201ENST00000565058 6943 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.16□□□□□ -1.42
HLA-DOAP06340 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DOAP06340 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms