Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU1-20P-201ENST00000363314 162 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AL021331.1-201ENST00000402817 582 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 VN1R37P-201ENST00000419096 748 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 PDSS1P1-201ENST00000422953 1114 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC104651.2-201ENST00000447549 528 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC097484.1-201ENST00000471148 389 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 RN7SL727P-201ENST00000482164 296 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC004815.1-201ENST00000484185 331 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 RN7SKP66-201ENST00000516681 231 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 RN7SKP260-201ENST00000516907 149 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC092490.3-201ENST00000545370 572 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 RN7SL176P-201ENST00000580352 264 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC105254.2-201ENST00000603636 436 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 SDR42E1P1-201ENST00000611327 477 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AL356752.1-201ENST00000615844 593 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 CR788268.1-201ENST00000603931 1809 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC116158.1-201ENST00000560231 2129 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC027290.2-201ENST00000623210 18662 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 OR51C1P-202ENST00000641159 1444 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC109780.1-201ENST00000451768 1344 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 RNU1-94P-201ENST00000362627 173 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 MIR921-201ENST00000401133 56 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AL080315.1-201ENST00000406055 466 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 DPPA2P3-201ENST00000411853 655 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AL358176.3-201ENST00000420757 454 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 SCAND3P1-201ENST00000439854 1060 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 RPL34P20-201ENST00000442771 351 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 SUMO2P4-201ENST00000504193 276 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC011270.1-201ENST00000558606 583 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 SNORA74C-1-201ENST00000580726 201 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC006116.3-201ENST00000592968 361 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC026979.4-201ENST00000606555 645 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 RNU6-84P-201ENST00000607737 102 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC243960.7-201ENST00000623532 707 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AC055839.1-201ENST00000634467 498 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 LINC01739-205ENST00000641890 573 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPB1P04440 AP001002.1-201ENST00000625148 1513 ntBASIC4.31□□□□□ -1.72
HLA-DPB1P04440 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 NXF4-202ENST00000416098 1465 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms