Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC111000.3-201ENST00000508057 576 ntBASIC4.67□□□□□ -1.66
TNFP01375 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.67□□□□□ -1.66
TNFP01375 OR7A19P-201ENST00000608051 733 ntBASIC4.67□□□□□ -1.66
TNFP01375 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TNFP01375 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TNFP01375 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TNFP01375 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.67□□□□□ -1.66
TNFP01375 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TNFP01375 AC023632.6-201ENST00000624338 2177 ntBASIC4.67□□□□□ -1.66
TNFP01375 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.67□□□□□ -1.66
TNFP01375 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TNFP01375 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TNFP01375 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TNFP01375 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TNFP01375 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TNFP01375 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TNFP01375 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TNFP01375 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
TNFP01375 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TNFP01375 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TNFP01375 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFP01375 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TNFP01375 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TNFP01375 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.66□□□□□ -1.66
TNFP01375 AC004817.4-201ENST00000602396 3625 ntBASIC4.66□□□□□ -1.66
TNFP01375 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TNFP01375 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TNFP01375 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFP01375 ATG4AP1-201ENST00000416893 538 ntBASIC4.66□□□□□ -1.66
TNFP01375 CENPIP1-201ENST00000425713 902 ntBASIC4.66□□□□□ -1.66
TNFP01375 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.66□□□□□ -1.66
TNFP01375 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFP01375 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TNFP01375 ARL2BPP10-201ENST00000446487 531 ntBASIC4.66□□□□□ -1.66
TNFP01375 H2AFZP5-201ENST00000446960 382 ntBASIC4.66□□□□□ -1.66
TNFP01375 CEACAMP6-201ENST00000452007 574 ntBASIC4.66□□□□□ -1.66
TNFP01375 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFP01375 AL356981.1-201ENST00000454879 684 ntBASIC4.66□□□□□ -1.66
TNFP01375 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.66□□□□□ -1.66
TNFP01375 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.66□□□□□ -1.66
TNFP01375 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFP01375 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFP01375 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.66□□□□□ -1.66
TNFP01375 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFP01375 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.66□□□□□ -1.66
TNFP01375 AC093249.4-201ENST00000564755 259 ntBASIC4.66□□□□□ -1.66
TNFP01375 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.66□□□□□ -1.66
TNFP01375 ELOCP28-201ENST00000590044 317 ntBASIC4.66□□□□□ -1.66
TNFP01375 AC093765.1-201ENST00000603758 881 ntBASIC4.66□□□□□ -1.66
TNFP01375 AC138965.3-201ENST00000623875 498 ntBASIC4.66□□□□□ -1.66
TNFP01375 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
TNFP01375 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFP01375 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.66□□□□□ -1.66
TNFP01375 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
TNFP01375 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TNFP01375 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.66□□□□□ -1.66
TNFP01375 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TNFP01375 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.65□□□□□ -1.66
TNFP01375 Z98755.1-201ENST00000407015 1384 ntBASIC4.65□□□□□ -1.66
TNFP01375 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TNFP01375 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TNFP01375 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TNFP01375 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
TNFP01375 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TNFP01375 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
TNFP01375 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.65□□□□□ -1.66
TNFP01375 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
TNFP01375 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
TNFP01375 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
TNFP01375 SNORD113.2-201ENST00000364166 89 ntBASIC4.65□□□□□ -1.67
TNFP01375 SNORA70F-201ENST00000384142 135 ntBASIC4.65□□□□□ -1.67
TNFP01375 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.65□□□□□ -1.67
TNFP01375 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.65□□□□□ -1.67
TNFP01375 AC140479.3-201ENST00000418944 1126 ntBASIC4.65□□□□□ -1.67
TNFP01375 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.65□□□□□ -1.67
TNFP01375 TXNP2-201ENST00000443918 295 ntBASIC4.65□□□□□ -1.67
TNFP01375 AL162591.2-201ENST00000449634 317 ntBASIC4.65□□□□□ -1.67
TNFP01375 AC021660.1-201ENST00000465006 554 ntBASIC4.65□□□□□ -1.67
TNFP01375 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.65□□□□□ -1.67
TNFP01375 RN7SL346P-201ENST00000491561 294 ntBASIC4.65□□□□□ -1.67
TNFP01375 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.65□□□□□ -1.67
TNFP01375 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.65□□□□□ -1.67
TNFP01375 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.65□□□□□ -1.67
TNFP01375 AC009852.2-201ENST00000567898 485 ntBASIC4.65□□□□□ -1.67
TNFP01375 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.65□□□□□ -1.67
TNFP01375 AC020915.5-201ENST00000596836 964 ntBASIC4.65□□□□□ -1.67
TNFP01375 AC068790.4-201ENST00000602474 263 ntBASIC4.65□□□□□ -1.67
TNFP01375 AL023583.1-201ENST00000607518 1143 ntBASIC4.65□□□□□ -1.67
TNFP01375 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TNFP01375 AC011815.3-201ENST00000624194 473 ntBASIC4.65□□□□□ -1.67
TNFP01375 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.65□□□□□ -1.67
TNFP01375 AC006453.5-201ENST00000636451 619 ntBASIC4.65□□□□□ -1.67
TNFP01375 AC006971.1-201ENST00000407916 4486 ntBASIC4.65□□□□□ -1.67
TNFP01375 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TNFP01375 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TNFP01375 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TNFP01375 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
TNFP01375 DDX18P5-201ENST00000534547 1306 ntBASIC4.65□□□□□ -1.67
TNFP01375 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.65□□□□□ -1.67
TNFP01375 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms