Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNOT4O95628 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.74□□□□□ -1.49
CNOT4O95628 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.74□□□□□ -1.49
CNOT4O95628 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.74□□□□□ -1.49
CNOT4O95628 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.74□□□□□ -1.49
CNOT4O95628 AP001264.1-201ENST00000620602 703 ntBASIC5.74□□□□□ -1.49
CNOT4O95628 AC022400.9-201ENST00000623633 273 ntBASIC5.74□□□□□ -1.49
CNOT4O95628 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CNOT4O95628 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CNOT4O95628 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.74□□□□□ -1.49
CNOT4O95628 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.74□□□□□ -1.49
CNOT4O95628 AC105114.1-201ENST00000624795 1862 ntBASIC5.74□□□□□ -1.49
CNOT4O95628 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CNOT4O95628 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNOT4O95628 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNOT4O95628 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
CNOT4O95628 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CNOT4O95628 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CNOT4O95628 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.74□□□□□ -1.49
CNOT4O95628 AC007996.1-201ENST00000620414 2821 ntBASIC5.74□□□□□ -1.49
CNOT4O95628 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNOT4O95628 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
CNOT4O95628 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.74□□□□□ -1.49
CNOT4O95628 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.74□□□□□ -1.49
CNOT4O95628 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CNOT4O95628 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CNOT4O95628 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.74□□□□□ -1.49
CNOT4O95628 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNOT4O95628 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNOT4O95628 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNOT4O95628 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.73□□□□□ -1.49
CNOT4O95628 CCT8P1-201ENST00000413611 1657 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AP000776.1-201ENST00000530032 1663 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CNOT4O95628 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CNOT4O95628 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNOT4O95628 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
CNOT4O95628 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CNOT4O95628 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.73□□□□□ -1.49
CNOT4O95628 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.73□□□□□ -1.49
CNOT4O95628 AL391994.1-201ENST00000254724 282 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNOT4O95628 AL672167.1-206ENST00000356293 943 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNOT4O95628 Y_RNA.41-201ENST00000362646 102 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 U3.4-201ENST00000363352 213 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 snoZ40.1-201ENST00000364540 72 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CNOT4O95628 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CNOT4O95628 U3.23-201ENST00000391132 200 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC005522.1-201ENST00000395416 346 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 RNA5SP431-201ENST00000410312 120 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 RN7SKP240-201ENST00000410583 375 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC009302.1-201ENST00000417147 390 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 RPL21P50-201ENST00000417698 477 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AL139421.1-201ENST00000423010 169 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.73□□□□□ -1.49
CNOT4O95628 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.73□□□□□ -1.49
CNOT4O95628 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.73□□□□□ -1.49
CNOT4O95628 AC009784.1-201ENST00000426484 460 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.73□□□□□ -1.49
CNOT4O95628 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.73□□□□□ -1.49
CNOT4O95628 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.73□□□□□ -1.49
CNOT4O95628 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.73□□□□□ -1.49
CNOT4O95628 ARMC4P1-201ENST00000438905 707 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.73□□□□□ -1.49
CNOT4O95628 POU5F1P5-201ENST00000445059 658 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 HMGN1P2-201ENST00000445197 310 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.73□□□□□ -1.49
CNOT4O95628 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.73□□□□□ -1.49
CNOT4O95628 RN7SL362P-201ENST00000494228 267 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.73□□□□□ -1.49
CNOT4O95628 AC018645.1-201ENST00000505003 109 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC004069.2-201ENST00000505438 1114 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 snoZ278.1-201ENST00000517059 112 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
CNOT4O95628 AC135983.3-201ENST00000528049 1226 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.73□□□□□ -1.49
CNOT4O95628 AL139174.1-201ENST00000531489 886 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
CNOT4O95628 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.73□□□□□ -1.49
CNOT4O95628 AC016957.1-201ENST00000534895 309 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC006512.2-201ENST00000543250 486 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.73□□□□□ -1.49
CNOT4O95628 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.73□□□□□ -1.49
CNOT4O95628 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.73□□□□□ -1.49
CNOT4O95628 CYP2C60P-201ENST00000566088 139 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.73□□□□□ -1.49
CNOT4O95628 MIR548S-201ENST00000581352 82 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.73□□□□□ -1.49
CNOT4O95628 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.73□□□□□ -1.49
CNOT4O95628 MTCYBP22-201ENST00000603788 447 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AL157899.1-201ENST00000604110 936 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC012409.3-201ENST00000611343 981 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC008498.1-201ENST00000613012 531 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 AC010678.1-201ENST00000614118 713 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.73□□□□□ -1.49
CNOT4O95628 AC073569.3-201ENST00000619055 682 ntBASIC5.73□□□□□ -1.49
CNOT4O95628 MIR6811-201ENST00000620409 58 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms