Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.61□□□□□ -1.51
PHGDHO43175 HSPE1P2-201ENST00000554777 306 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.61□□□□□ -1.51
PHGDHO43175 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.61□□□□□ -1.51
PHGDHO43175 AC002310.3-201ENST00000569728 723 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PHGDHO43175 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 AC008751.2-201ENST00000597885 980 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 AC008536.1-201ENST00000602872 669 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 MTND3P19-201ENST00000603825 345 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PHGDHO43175 AC107952.2-201ENST00000606048 486 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 MIR7973-1-201ENST00000614683 76 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 AC007786.3-201ENST00000615154 596 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PHGDHO43175 LINC02211-204ENST00000642024 1070 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 AC144833.1-201ENST00000567953 4089 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHGDHO43175 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.6□□□□□ -1.51
PHGDHO43175 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 GTF2IP4-201ENST00000453092 2054 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 OR4F13P-202ENST00000560066 2054 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PHGDHO43175 RNF6P1-201ENST00000444889 1784 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 CAP1P2-201ENST00000417455 1409 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 HSPA8P17-201ENST00000427029 1382 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AC005261.4-201ENST00000600047 1385 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 RNU4-92P-201ENST00000363783 136 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 RNU1-65P-201ENST00000363919 148 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PHGDHO43175 U3.28-201ENST00000391249 210 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 RNU2-18P-201ENST00000411224 162 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AL133482.1-201ENST00000415988 498 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AL356320.2-201ENST00000417263 507 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.6□□□□□ -1.51
PHGDHO43175 HMGB1P45-201ENST00000435986 653 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AC009263.1-201ENST00000441193 1239 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.6□□□□□ -1.51
PHGDHO43175 LINC02210-201ENST00000444561 288 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.6□□□□□ -1.51
PHGDHO43175 PTENP1-201ENST00000447117 1215 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.6□□□□□ -1.51
PHGDHO43175 RPL7AP52-201ENST00000458096 790 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 SNORD125-201ENST00000459538 96 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.6□□□□□ -1.51
PHGDHO43175 RN7SL570P-201ENST00000484405 292 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.6□□□□□ -1.51
PHGDHO43175 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.6□□□□□ -1.51
PHGDHO43175 AC021106.1-201ENST00000509020 1058 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AC114781.3-201ENST00000512083 142 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 SNORA70.11-201ENST00000515987 138 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 SNORA70.13-201ENST00000516116 138 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 RN7SKP253-201ENST00000516424 309 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AC021678.3-201ENST00000517893 476 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.6□□□□□ -1.51
PHGDHO43175 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PHGDHO43175 YWHABP2-201ENST00000540201 713 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.6□□□□□ -1.51
PHGDHO43175 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.6□□□□□ -1.51
PHGDHO43175 MTND3P13-201ENST00000574391 343 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.6□□□□□ -1.51
PHGDHO43175 MIR4260-201ENST00000583107 67 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.6□□□□□ -1.51
PHGDHO43175 AL020997.3-201ENST00000602843 359 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.6□□□□□ -1.51
PHGDHO43175 MIR6780B-201ENST00000610307 79 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AL591926.1-201ENST00000620542 217 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
PHGDHO43175 AC073869.7-201ENST00000640874 297 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PHGDHO43175 AC138393.1-206ENST00000540997 1886 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.6□□□□□ -1.51
PHGDHO43175 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.6□□□□□ -1.51
PHGDHO43175 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PHGDHO43175 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PHGDHO43175 AL360270.2-201ENST00000562952 5985 ntBASIC5.6□□□□□ -1.51
PHGDHO43175 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms