Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.82□□□□□ -1.64
LSM1O15116 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.82□□□□□ -1.64
LSM1O15116 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.82□□□□□ -1.64
LSM1O15116 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LSM1O15116 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LSM1O15116 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.82□□□□□ -1.64
LSM1O15116 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.82□□□□□ -1.64
LSM1O15116 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.82□□□□□ -1.64
LSM1O15116 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.82□□□□□ -1.64
LSM1O15116 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.82□□□□□ -1.64
LSM1O15116 SNX18P1Y-201ENST00000616231 511 ntBASIC4.82□□□□□ -1.64
LSM1O15116 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.82□□□□□ -1.64
LSM1O15116 MIR6837-201ENST00000620884 64 ntBASIC4.82□□□□□ -1.64
LSM1O15116 BMS1P21-201ENST00000634565 365 ntBASIC4.82□□□□□ -1.64
LSM1O15116 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.82□□□□□ -1.64
LSM1O15116 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.82□□□□□ -1.64
LSM1O15116 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LSM1O15116 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.82□□□□□ -1.64
LSM1O15116 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.82□□□□□ -1.64
LSM1O15116 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.82□□□□□ -1.64
LSM1O15116 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LSM1O15116 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
LSM1O15116 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LSM1O15116 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LSM1O15116 SNORA17.1-201ENST00000362945 126 ntBASIC4.81□□□□□ -1.64
LSM1O15116 SNORA73.1-201ENST00000363107 205 ntBASIC4.81□□□□□ -1.64
LSM1O15116 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LSM1O15116 AC104297.1-201ENST00000393779 870 ntBASIC4.81□□□□□ -1.64
LSM1O15116 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 RN7SKP59-201ENST00000410520 314 ntBASIC4.81□□□□□ -1.64
LSM1O15116 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.81□□□□□ -1.64
LSM1O15116 RPL35AP24-201ENST00000413846 330 ntBASIC4.81□□□□□ -1.64
LSM1O15116 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.81□□□□□ -1.64
LSM1O15116 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.81□□□□□ -1.64
LSM1O15116 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
LSM1O15116 PCNPP2-201ENST00000441651 455 ntBASIC4.81□□□□□ -1.64
LSM1O15116 GEMIN8P3-201ENST00000445417 720 ntBASIC4.81□□□□□ -1.64
LSM1O15116 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.81□□□□□ -1.64
LSM1O15116 CYCSP34-201ENST00000458172 304 ntBASIC4.81□□□□□ -1.64
LSM1O15116 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.81□□□□□ -1.64
LSM1O15116 AC009127.1-201ENST00000467090 155 ntBASIC4.81□□□□□ -1.64
LSM1O15116 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.81□□□□□ -1.64
LSM1O15116 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.81□□□□□ -1.64
LSM1O15116 AC113398.2-201ENST00000507630 558 ntBASIC4.81□□□□□ -1.64
LSM1O15116 NDUFB4P12-201ENST00000513465 390 ntBASIC4.81□□□□□ -1.64
LSM1O15116 RNA5SP249-201ENST00000516127 99 ntBASIC4.81□□□□□ -1.64
LSM1O15116 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.81□□□□□ -1.64
LSM1O15116 MYL12AP1-201ENST00000518490 515 ntBASIC4.81□□□□□ -1.64
LSM1O15116 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 AL049779.2-201ENST00000553847 315 ntBASIC4.81□□□□□ -1.64
LSM1O15116 GLRXP2-201ENST00000555594 321 ntBASIC4.81□□□□□ -1.64
LSM1O15116 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.81□□□□□ -1.64
LSM1O15116 AC115989.2-201ENST00000578640 563 ntBASIC4.81□□□□□ -1.64
LSM1O15116 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.81□□□□□ -1.64
LSM1O15116 FKBP1AP1-201ENST00000594588 318 ntBASIC4.81□□□□□ -1.64
LSM1O15116 AC010615.3-201ENST00000597319 394 ntBASIC4.81□□□□□ -1.64
LSM1O15116 AC095055.1-201ENST00000603472 1113 ntBASIC4.81□□□□□ -1.64
LSM1O15116 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.81□□□□□ -1.64
LSM1O15116 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.81□□□□□ -1.64
LSM1O15116 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LSM1O15116 CASC19-264ENST00000641912 1184 ntBASIC4.81□□□□□ -1.64
LSM1O15116 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 VPS35P1-201ENST00000563400 1518 ntBASIC4.81□□□□□ -1.64
LSM1O15116 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LSM1O15116 AC012020.1-201ENST00000624541 1728 ntBASIC4.8□□□□□ -1.64
LSM1O15116 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LSM1O15116 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LSM1O15116 MAPK10-303ENST00000641324 3959 ntBASIC4.8□□□□□ -1.64
LSM1O15116 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.8□□□□□ -1.64
LSM1O15116 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LSM1O15116 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.8□□□□□ -1.64
LSM1O15116 AL445487.1-201ENST00000415694 1580 ntBASIC4.8□□□□□ -1.64
LSM1O15116 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LSM1O15116 IL6STP1-201ENST00000346911 1020 ntBASIC4.8□□□□□ -1.64
LSM1O15116 RNU1-43P-201ENST00000365052 165 ntBASIC4.8□□□□□ -1.64
LSM1O15116 MIR143-201ENST00000385300 106 ntBASIC4.8□□□□□ -1.64
LSM1O15116 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LSM1O15116 SNORA11.5-201ENST00000408163 128 ntBASIC4.8□□□□□ -1.64
LSM1O15116 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.8□□□□□ -1.64
LSM1O15116 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.8□□□□□ -1.64
LSM1O15116 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.8□□□□□ -1.64
LSM1O15116 AC073052.1-201ENST00000440417 714 ntBASIC4.8□□□□□ -1.64
LSM1O15116 AL354714.3-201ENST00000447284 493 ntBASIC4.8□□□□□ -1.64
LSM1O15116 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.8□□□□□ -1.64
LSM1O15116 AC144530.1-201ENST00000452862 555 ntBASIC4.8□□□□□ -1.64
LSM1O15116 AL133244.1-201ENST00000456007 258 ntBASIC4.8□□□□□ -1.64
LSM1O15116 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.8□□□□□ -1.64
LSM1O15116 RN7SL799P-201ENST00000475891 298 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms