Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX1O00570 AC109315.1-201ENST00000584143 1347 ntBASIC6.83□□□□□ -1.32
SOX1O00570 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX1O00570 AC023421.1-201ENST00000590535 1785 ntBASIC6.83□□□□□ -1.32
SOX1O00570 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.83□□□□□ -1.32
SOX1O00570 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX1O00570 RNU6-543P-201ENST00000362576 108 ntBASIC6.83□□□□□ -1.32
SOX1O00570 Y_RNA.302-201ENST00000364997 102 ntBASIC6.83□□□□□ -1.32
SOX1O00570 MIR550A3-201ENST00000390735 95 ntBASIC6.83□□□□□ -1.32
SOX1O00570 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX1O00570 CYCSP45-201ENST00000402289 315 ntBASIC6.83□□□□□ -1.32
SOX1O00570 PRELID1P2-201ENST00000407805 396 ntBASIC6.83□□□□□ -1.32
SOX1O00570 RN7SKP285-201ENST00000410137 318 ntBASIC6.83□□□□□ -1.32
SOX1O00570 AC009237.5-201ENST00000414271 501 ntBASIC6.83□□□□□ -1.32
SOX1O00570 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX1O00570 MTCYBP24-201ENST00000420387 1106 ntBASIC6.83□□□□□ -1.32
SOX1O00570 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX1O00570 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC6.83□□□□□ -1.32
SOX1O00570 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX1O00570 AL050321.1-201ENST00000432363 400 ntBASIC6.83□□□□□ -1.32
SOX1O00570 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX1O00570 PIP5K1P2-201ENST00000437005 1120 ntBASIC6.83□□□□□ -1.32
SOX1O00570 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX1O00570 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.83□□□□□ -1.32
SOX1O00570 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.83□□□□□ -1.32
SOX1O00570 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX1O00570 AL034418.1-201ENST00000448675 860 ntBASIC6.83□□□□□ -1.32
SOX1O00570 AZGP1P2-201ENST00000454506 345 ntBASIC6.83□□□□□ -1.32
SOX1O00570 PNPLA4P1-201ENST00000458328 305 ntBASIC6.83□□□□□ -1.32
SOX1O00570 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.83□□□□□ -1.32
SOX1O00570 RPS7P6-201ENST00000485777 579 ntBASIC6.83□□□□□ -1.32
SOX1O00570 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
SOX1O00570 AC008628.2-201ENST00000502605 298 ntBASIC6.83□□□□□ -1.32
SOX1O00570 AC105252.1-201ENST00000503089 286 ntBASIC6.83□□□□□ -1.32
SOX1O00570 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.83□□□□□ -1.32
SOX1O00570 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.83□□□□□ -1.32
SOX1O00570 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX1O00570 EEF1B2P2-201ENST00000519625 676 ntBASIC6.83□□□□□ -1.32
SOX1O00570 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX1O00570 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX1O00570 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.83□□□□□ -1.32
SOX1O00570 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
SOX1O00570 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.83□□□□□ -1.32
SOX1O00570 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX1O00570 AC091078.2-201ENST00000557145 559 ntBASIC6.83□□□□□ -1.32
SOX1O00570 AC023827.2-201ENST00000566880 1061 ntBASIC6.83□□□□□ -1.32
SOX1O00570 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.83□□□□□ -1.32
SOX1O00570 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX1O00570 AL117336.2-201ENST00000602435 335 ntBASIC6.83□□□□□ -1.32
SOX1O00570 AP001823.1-201ENST00000604056 1003 ntBASIC6.83□□□□□ -1.32
SOX1O00570 AC090578.1-201ENST00000604955 591 ntBASIC6.83□□□□□ -1.32
SOX1O00570 RPL12P48-201ENST00000605620 304 ntBASIC6.83□□□□□ -1.32
SOX1O00570 STMN1P1-201ENST00000617809 440 ntBASIC6.83□□□□□ -1.32
SOX1O00570 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.83□□□□□ -1.32
SOX1O00570 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
SOX1O00570 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX1O00570 OFD1P17-201ENST00000437639 3018 ntBASIC6.83□□□□□ -1.32
SOX1O00570 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
SOX1O00570 NSRP1P1-201ENST00000444067 1693 ntBASIC6.83□□□□□ -1.32
SOX1O00570 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.83□□□□□ -1.32
SOX1O00570 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX1O00570 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.83□□□□□ -1.32
SOX1O00570 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX1O00570 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.83□□□□□ -1.32
SOX1O00570 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.83□□□□□ -1.32
SOX1O00570 SPATA2P1-201ENST00000431223 2055 ntBASIC6.83□□□□□ -1.32
SOX1O00570 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
SOX1O00570 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
SOX1O00570 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX1O00570 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.82□□□□□ -1.32
SOX1O00570 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
SOX1O00570 AC023245.2-201ENST00000530760 2978 ntBASIC6.82□□□□□ -1.32
SOX1O00570 MTCO1P23-201ENST00000415223 1526 ntBASIC6.82□□□□□ -1.32
SOX1O00570 WDR95P-201ENST00000425638 1542 ntBASIC6.82□□□□□ -1.32
SOX1O00570 CR383658.2-201ENST00000547576 1525 ntBASIC6.82□□□□□ -1.32
SOX1O00570 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX1O00570 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
SOX1O00570 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX1O00570 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX1O00570 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX1O00570 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SOX1O00570 HCG18-244ENST00000602516 2890 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AL355377.1-201ENST00000621125 1653 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AP002001.2-201ENST00000529025 1469 ntBASIC6.82□□□□□ -1.32
SOX1O00570 Y_RNA.9-201ENST00000362354 101 ntBASIC6.82□□□□□ -1.32
SOX1O00570 SNORA64.1-201ENST00000362600 132 ntBASIC6.82□□□□□ -1.32
SOX1O00570 RNU6-660P-201ENST00000364566 109 ntBASIC6.82□□□□□ -1.32
SOX1O00570 RPL9P21-201ENST00000392269 505 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AC007068.1-201ENST00000396690 844 ntBASIC6.82□□□□□ -1.32
SOX1O00570 RAB28P1-201ENST00000411517 641 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.82□□□□□ -1.32
SOX1O00570 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.82□□□□□ -1.32
SOX1O00570 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.82□□□□□ -1.32
SOX1O00570 Z80107.2-201ENST00000445127 392 ntBASIC6.82□□□□□ -1.32
SOX1O00570 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX1O00570 HIGD1AP16-201ENST00000450986 258 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AL606490.1-201ENST00000452266 765 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AC103563.5-201ENST00000455643 364 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AP000852.1-201ENST00000472460 573 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms