Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AC007485.2-201ENST00000623493 1667 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 RN7SKP121-201ENST00000410842 305 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 RPL17P12-201ENST00000413391 526 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 OFD1P12Y-201ENST00000427963 1207 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AC073909.1-201ENST00000447112 999 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 RPS7P7-201ENST00000463499 571 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AC026254.2-201ENST00000475295 371 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AC092865.4-201ENST00000477936 615 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 RPS27P23-201ENST00000487608 251 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AC022206.1-201ENST00000495947 347 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AC108078.3-201ENST00000502633 489 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 RN7SKP298-201ENST00000515950 94 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 OR6C7P-201ENST00000547875 934 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AC004232.1-201ENST00000571388 208 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 MIR4505-201ENST00000582238 73 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AC083760.1-201ENST00000589621 670 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AC091768.1-201ENST00000609258 930 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 SEPT14P19-203ENST00000633205 211 ntBASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TMEM88BA6NKF7 AL133243.2-201ENST00000610331 1621 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AL008638.3-201ENST00000623027 5182 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 SPATA31C2-201ENST00000324915 3777 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 SNORD116-23-201ENST00000384645 92 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC092647.1-201ENST00000420654 287 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 RPS27AP7-201ENST00000422792 455 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 ISCA1P1-201ENST00000426679 387 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC010975.2-201ENST00000427781 588 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 GCA-203ENST00000429691 824 ntTSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 COPS8P2-201ENST00000473228 627 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 RN7SL727P-201ENST00000482164 296 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 NPM1P6-201ENST00000521088 871 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AP002453.2-201ENST00000533503 320 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms