Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC002553.2-201ENST00000453217 340 ntBASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 AC023141.9-201ENST00000458734 412 ntBASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 SNORD11.1-201ENST00000459482 85 ntBASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 snoZ278.1-201ENST00000517059 112 ntBASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 IGJP1-201ENST00000522682 475 ntBASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 DPPA2P4-201ENST00000563717 878 ntBASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 AL158211.1-201ENST00000566763 763 ntBASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 MTND4LP24-201ENST00000572277 291 ntBASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 ELOCP34-201ENST00000604436 327 ntBASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 AL355816.1-201ENST00000607951 118 ntBASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 AC008147.4-201ENST00000617570 1204 ntBASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 AC009452.1-201ENST00000640823 606 ntBASIC6.4□□□□□ -1.38
COL4A3BPQ9Y5P4 AC099786.3-201ENST00000565735 1410 ntBASIC6.4□□□□□ -1.39
COL4A3BPQ9Y5P4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL4A3BPQ9Y5P4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC02019-201ENST00000608605 2060 ntBASIC6.4□□□□□ -1.39
COL4A3BPQ9Y5P4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.4□□□□□ -1.39
COL4A3BPQ9Y5P4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
COL4A3BPQ9Y5P4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC138393.1-206ENST00000540997 1886 ntBASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 RNA5SP46-201ENST00000362370 120 ntBASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 RNA5SP91-201ENST00000390902 119 ntBASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 RPL7P4-203ENST00000430239 730 ntBASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC002504.1-201ENST00000438281 691 ntBASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC092809.1-201ENST00000441469 474 ntBASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 RPS26P30-201ENST00000443431 335 ntBASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 MEMO1P4-201ENST00000453590 386 ntBASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC009120.1-201ENST00000493458 473 ntBASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 OR7E157P-201ENST00000494376 911 ntBASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 OR7E128P-201ENST00000532736 1024 ntBASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 VN1R7P-201ENST00000619242 903 ntBASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC138907.8-201ENST00000623981 2256 ntBASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
COL4A3BPQ9Y5P4 AC009229.4-201ENST00000623854 1947 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 RNU6-906P-201ENST00000384700 70 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 RN7SKP293-201ENST00000411389 296 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 OR51B3P-201ENST00000412287 913 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 OR2AT2P-201ENST00000413438 905 ntBASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.38□□□□□ -1.39
COL4A3BPQ9Y5P4 AL662874.1-201ENST00000426065 230 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms