Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC090017.1-201ENST00000548612 1779 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 UG0898H09-202ENST00000623646 7040 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AP000473.2-201ENST00000602659 1537 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 ZNF840P-201ENST00000504759 1996 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC125232.1-201ENST00000452554 1408 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 IMMTP1-201ENST00000435590 2219 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 Y_RNA.144-201ENST00000363521 113 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 SNORA75.4-201ENST00000391278 119 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AL121972.1-201ENST00000402023 252 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 RPS6P23-201ENST00000413224 722 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 RPL26P29-201ENST00000415623 438 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 RPL23AP19-201ENST00000436229 369 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 CEACAMP5-201ENST00000448037 961 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 RNU7-27P-201ENST00000459281 62 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC013356.1-201ENST00000489027 564 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC103851.1-201ENST00000506833 274 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC025674.1-201ENST00000507074 324 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 RPL7L1P7-201ENST00000509986 724 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 RNU7-30P-201ENST00000516835 62 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC009027.1-201ENST00000604510 479 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 RNU6-87P-201ENST00000607561 108 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 DISC2.1-201ENST00000612827 205 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC005899.6-201ENST00000620729 297 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC005753.1-201ENST00000623837 618 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC006453.3-201ENST00000635891 377 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 MTND5P23-201ENST00000430812 1655 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 RLIMP2-201ENST00000427891 1563 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC108467.2-201ENST00000617640 1597 ntBASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHB11Q9Y5F2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AL512353.3-201ENST00000417517 1326 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 OR11H5P-202ENST00000641612 1325 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms